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Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
Maxime Garcia, Szilveszter Juhos, Malin Larsson, Pall I. Olason, Marcel Martin, Jesper Eisfeldt, Sebastian DiLorenzo, Johanna Sandgren, Teresita Diaz de Ståhl, Valtteri Wirta, Monica Nistér, Björn Nystedt, Max Käller
doi: https://doi.org/10.1101/316976
Maxime Garcia
1BarnTumörBanken, Department of Oncology Pathology, Science for Life Laboratory, Karolinska Institutet, Sweden
Szilveszter Juhos
1BarnTumörBanken, Department of Oncology Pathology, Science for Life Laboratory, Karolinska Institutet, Sweden
2Department of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Sweden
Malin Larsson
3Department of Physics, Chemistry and Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Linköping University, 581 83 Linköping, Sweden
Pall I. Olason
4Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Husargatan 3, SE-752 37 Uppsala, Sweden
Marcel Martin
5Department of Biochemistry and Biophysics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Stockholm University, Box 1031, SE-17121 Solna, Sweden
Jesper Eisfeldt
6Clinical Genetics, Department of Molecular Medicine and Surgery, Karolinska Institutet
Sebastian DiLorenzo
7Department of Medical Sciences, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University
Johanna Sandgren
8BarnTumörBanken, Department of Oncology Pathology, Karolinska Institutet
Teresita Diaz de Ståhl
8BarnTumörBanken, Department of Oncology Pathology, Karolinska Institutet
Valtteri Wirta
9Department of Microbiology, Tumor and Cell Biology, Clinical Genomics Facility, Science for Life Laboratory, Karolinska Institutet, Box 1031 171 21 Solna, Sweden
Monica Nistér
8BarnTumörBanken, Department of Oncology Pathology, Karolinska Institutet
Björn Nystedt
4Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Husargatan 3, SE-752 37 Uppsala, Sweden
Max Käller
10SciLifeLab, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, Sweden
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Posted May 09, 2018.
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
Maxime Garcia, Szilveszter Juhos, Malin Larsson, Pall I. Olason, Marcel Martin, Jesper Eisfeldt, Sebastian DiLorenzo, Johanna Sandgren, Teresita Diaz de Ståhl, Valtteri Wirta, Monica Nistér, Björn Nystedt, Max Käller
bioRxiv 316976; doi: https://doi.org/10.1101/316976
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
Maxime Garcia, Szilveszter Juhos, Malin Larsson, Pall I. Olason, Marcel Martin, Jesper Eisfeldt, Sebastian DiLorenzo, Johanna Sandgren, Teresita Diaz de Ståhl, Valtteri Wirta, Monica Nistér, Björn Nystedt, Max Käller
bioRxiv 316976; doi: https://doi.org/10.1101/316976
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