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Mitochondrial control of glycerolipid synthesis by a PEP shuttle

View ORCID ProfileTadashi Yamamuro, View ORCID ProfileDaisuke Katoh, View ORCID ProfileGuilherme Martins Silva, View ORCID ProfileHiroshi Nishida, View ORCID ProfileSatoshi Oikawa, View ORCID ProfileYusuke Higuchi, View ORCID ProfileDandan Wang, View ORCID ProfileMasanori Fujimoto, View ORCID ProfileNaofumi Yoshida, View ORCID ProfileMark Li, View ORCID ProfileJihoon Shin, View ORCID ProfileZezhou Zhao, View ORCID ProfileJin-Seon Yook, View ORCID ProfileLijun Sun, View ORCID ProfileShingo Kajimura
doi: https://doi.org/10.64898/2025.12.12.693842
Tadashi Yamamuro
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Tadashi Yamamuro
Daisuke Katoh
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Daisuke Katoh
Guilherme Martins Silva
2Center for Drug Discovery and Translational Research, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA
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  • ORCID record for Guilherme Martins Silva
Hiroshi Nishida
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Hiroshi Nishida
Satoshi Oikawa
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Satoshi Oikawa
Yusuke Higuchi
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Yusuke Higuchi
Dandan Wang
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Masanori Fujimoto
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Naofumi Yoshida
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Mark Li
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Jihoon Shin
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Zezhou Zhao
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Jin-Seon Yook
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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Lijun Sun
2Center for Drug Discovery and Translational Research, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA
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Shingo Kajimura
1Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, and Howard Hughes Medical Institute, Boston, MA, USA
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  • ORCID record for Shingo Kajimura
  • For correspondence: skajimur{at}bidmc.harvard.edu
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SUMMARY

Mitochondria provide a variety of metabolites, in addition to ATP, to meet cell-specific needs. One such metabolite is phosphoenolpyruvate (PEP), which contains a higher-energy phosphate bond than ATP and has diverse biological functions. However, how mitochondria-generated PEP is delivered to the cytosol and fulfills cell-specific requirements remains elusive. Here, we show that SLC25A35 regulates mitochondrial PEP efflux and glyceroneogenesis in lipogenic cells that utilize the pyruvate-to-PEP bypass. Reconstitution and structural studies demonstrated PEP transport by SLC25A35 in a pH gradient-dependent manner. Loss of SLC25A35 in adipocytes impaired the conversion of mitochondrial PEP into glycerol-3-phosphate, thereby reducing glycerolipid synthesis. Significantly, hepatic inhibition of SLC25A35 in obese mice alleviated steatosis and improved systemic glucose homeostasis. Together, these results suggest that mitochondria facilitate glycerolipid synthesis by providing PEP via SLC25A35, offering lipogenic mitochondria as a target to limit glycerolipid synthesis, a pivotal step in the pathogenesis of hepatic steatosis and Type 2 diabetes.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵3 Lead contact

  • We have added the source data file. The text, figures, and tables are unchanged.

  • http://dx.doi.org/10.21228/M86J9P

Funder Information Declared

National Institutes of Health, https://ror.org/01cwqze88, DK125283, DK097441, DK126160
Howard Hughes Medical Institute, https://ror.org/006w34k90
Takeda Science Foundation, https://ror.org/02y123g31
Yamada Science Foundation
Nakatomi Foundation, https://ror.org/0196vdc40
American Heart Association, 24POST1193689
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted March 10, 2026.
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Mitochondrial control of glycerolipid synthesis by a PEP shuttle
Tadashi Yamamuro, Daisuke Katoh, Guilherme Martins Silva, Hiroshi Nishida, Satoshi Oikawa, Yusuke Higuchi, Dandan Wang, Masanori Fujimoto, Naofumi Yoshida, Mark Li, Jihoon Shin, Zezhou Zhao, Jin-Seon Yook, Lijun Sun, Shingo Kajimura
bioRxiv 2025.12.12.693842; doi: https://doi.org/10.64898/2025.12.12.693842
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Mitochondrial control of glycerolipid synthesis by a PEP shuttle
Tadashi Yamamuro, Daisuke Katoh, Guilherme Martins Silva, Hiroshi Nishida, Satoshi Oikawa, Yusuke Higuchi, Dandan Wang, Masanori Fujimoto, Naofumi Yoshida, Mark Li, Jihoon Shin, Zezhou Zhao, Jin-Seon Yook, Lijun Sun, Shingo Kajimura
bioRxiv 2025.12.12.693842; doi: https://doi.org/10.64898/2025.12.12.693842

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