Maspero D[au] - Search Results

Year	Number of Results
1983	1
2017	1
2018	1
2019	2
2020	4
2021	4
2022	5
2023	1
2024	0

1

A review of computational strategies for denoising and imputation of single-cell transcriptomic data.

Patruno L, Maspero D, Craighero F, Angaroni F, Antoniotti M, Graudenzi A. Patruno L, et al. Among authors: maspero d. Brief Bioinform. 2021 Jul 20;22(4):bbaa222. doi: 10.1093/bib/bbaa222. Brief Bioinform. 2021. PMID: 33003202 Review.

2

Single-cell Digital Twins for Cancer Preclinical Investigation.

Filippo MD, Damiani C, Vanoni M, Maspero D, Mauri G, Alberghina L, Pescini D. Filippo MD, et al. Among authors: maspero d. Methods Mol Biol. 2020;2088:331-343. doi: 10.1007/978-1-0716-0159-4_15. Methods Mol Biol. 2020. PMID: 31893381

3

Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines.

Ramazzotti D, Angaroni F, Maspero D, Ascolani G, Castiglioni I, Piazza R, Antoniotti M, Graudenzi A. Ramazzotti D, et al. Among authors: maspero d. Nat Commun. 2022 May 12;13(1):2718. doi: 10.1038/s41467-022-30230-w. Nat Commun. 2022. PMID: 35551450 Free PMC article. No abstract available.

4

Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data.

Ramazzotti D, Maspero D, Angaroni F, Spinelli S, Antoniotti M, Piazza R, Graudenzi A. Ramazzotti D, et al. Among authors: maspero d. iScience. 2022 Jun 17;25(6):104487. doi: 10.1016/j.isci.2022.104487. Epub 2022 May 30. iScience. 2022. PMID: 35677393 Free PMC article.

5

Chemotherapy after PD-1 inhibitors in relapsed/refractory Hodgkin lymphoma: Outcomes and clonal evolution dynamics.

Calabretta E, Guidetti A, Ricci F, Di Trani M, Monfrini C, Magagnoli M, Bramanti S, Maspero D, Morello L, Merli M, Di Rocco A, Graudenzi A, Derenzini E, Antoniotti M, Rossi D, Corradini P, Santoro A, Carlo-Stella C. Calabretta E, et al. Among authors: maspero d. Br J Haematol. 2022 Jul;198(1):82-92. doi: 10.1111/bjh.18183. Epub 2022 Apr 25. Br J Haematol. 2022. PMID: 35468225 Free PMC article.

6

SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples.

Mella L, Lal A, Angaroni F, Maspero D, Piazza R, Sidow A, Antoniotti M, Graudenzi A, Ramazzotti D. Mella L, et al. Among authors: maspero d. STAR Protoc. 2022 Sep 16;3(3):101513. doi: 10.1016/j.xpro.2022.101513. Epub 2022 Jul 1. STAR Protoc. 2022. PMID: 35779264 Free PMC article.

7

popFBA: tackling intratumour heterogeneity with Flux Balance Analysis.

Damiani C, Di Filippo M, Pescini D, Maspero D, Colombo R, Mauri G. Damiani C, et al. Among authors: maspero d. Bioinformatics. 2017 Jul 15;33(14):i311-i318. doi: 10.1093/bioinformatics/btx251. Bioinformatics. 2017. PMID: 28881985 Free PMC article.

8

LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution.

Ascolani G, Angaroni F, Maspero D, Craighero F, Bhavesh NLS, Piazza R, Damiani C, Ramazzotti D, Antoniotti M, Graudenzi A. Ascolani G, et al. Among authors: maspero d. BMC Bioinformatics. 2023 Mar 17;24(1):99. doi: 10.1186/s12859-023-05221-3. BMC Bioinformatics. 2023. PMID: 36932333 Free PMC article.

9

Large-scale analysis of SARS-CoV-2 synonymous mutations reveals the adaptation to the human codon usage during the virus evolution.

Ramazzotti D, Angaroni F, Maspero D, Mauri M, D'Aliberti D, Fontana D, Antoniotti M, Elli EM, Graudenzi A, Piazza R. Ramazzotti D, et al. Among authors: maspero d. Virus Evol. 2022 Mar 24;8(1):veac026. doi: 10.1093/ve/veac026. eCollection 2022. Virus Evol. 2022. PMID: 35371557 Free PMC article.

10

Integration of single-cell RNA-seq data into population models to characterize cancer metabolism.

Damiani C, Maspero D, Di Filippo M, Colombo R, Pescini D, Graudenzi A, Westerhoff HV, Alberghina L, Vanoni M, Mauri G. Damiani C, et al. Among authors: maspero d. PLoS Comput Biol. 2019 Feb 28;15(2):e1006733. doi: 10.1371/journal.pcbi.1006733. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30818329 Free PMC article.

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