Structural analysis of substrate binding by the molecular chaperone DnaK

X Zhu, X Zhao, WF Burkholder, A Gragerov, CM Ogata… - Science, 1996 - science.org
Burkholder, A. Gragerov, ME Gottesman, and WA Hendrickson are in the Department of …
WF Burkholder and ME Gottesman are also in the Institute of Cancer Research, Columbia …

Interaction of the Hsp70 molecular chaperone, DnaK, with its cochaperone DnaJ

WC Suh, WF Burkholder, CZ Lu… - Proceedings of the …, 1998 - National Acad Sciences
Chaperones of the Hsp70 family bind to unfolded or partially folded polypeptides to facilitate
many cellular processes. ATP hydrolysis and substrate binding, the two key molecular …

[HTML][HTML] Replication initiation proteins regulate a developmental checkpoint in Bacillus subtilis

WF Burkholder, I Kurtser, AD Grossman - Cell, 2001 - cell.com
We identified a signaling pathway that prevents initiation of sporulation in Bacillus subtilis
when replication initiation is impaired. We isolated mutations that allow a replication initiation …

Single-cell multimodal profiling reveals cellular epigenetic heterogeneity

…, P Robson, YH Loh, SR Quake, WF Burkholder - Nature …, 2016 - nature.com
Sample heterogeneity often masks DNA methylation signatures in subpopulations of cells.
Here, we present a method to genotype single cells while simultaneously interrogating gene …

Single-cell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos

…, S Balu, SR Quake, BB Knowles, WF Burkholder… - science, 2013 - science.org
Epigenetic alterations are increasingly recognized as causes of human cancers and disease.
These aberrations are likely to arise during genomic reprogramming in mammalian …

[HTML][HTML] Individualised multiplexed circulating tumour DNA assays for monitoring of tumour presence in patients after colorectal cancer surgery

…, D Ho, S Rozen, P Tan, M Wong, WF Burkholder… - Scientific reports, 2017 - nature.com
Circulating tumour DNA (ctDNA) has the potential to be a specific biomarker for the monitoring
of tumours in patients with colorectal cancer (CRC). Here, our aim was to develop a …

[PDF][PDF] Structure and mechanism of action of Sda, an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis

SL Rowland, WF Burkholder, KA Cunningham… - Molecular cell, 2004 - cell.com
… between Sda and the KinA using Sda to inhibit the Spo0A phosphorelay (Burkholder
15N/13C-labeled Sda ( 1 mM in and Spo0F-His6) were produced as described (Burkholder et al., …

In Vivo Effects of Sporulation Kinases on Mutant Spo0A Proteins in Bacillus subtilis

JD Quisel, WF Burkholder, AD Grossman - Journal of bacteriology, 2001 - Am Soc Microbiol
Burkholder WF and Grossman AD Regulation of the initiation of endospore formation in
Bacillus subtilis Prokaryotic development. Brun YV and Shimkets LJ 2000 151 -166 American …

Single-nucleotide-resolution sequencing of human N6-methyldeoxyadenosine reveals strand-asymmetric clusters associated with SSBP1 on the mitochondrial …

…, YG Gao, SR Quake, WF Burkholder… - Nucleic acids …, 2018 - academic.oup.com
… William F Burkholder , William F Burkholder … We thank members of the Goh, Burkholder
and Quake laboratories for feedback and discussions. We also thank J. Ho and E. …

Multiplexed locus-specific analysis of DNA methylation in single cells

LF Cheow, SR Quake, WF Burkholder… - Nature protocols, 2015 - nature.com
This protocol details a method for measuring the DNA methylation state of multiple target
sites in single cells, otherwise known as single-cell restriction analysis of methylation (SCRAM). …