User profiles for V. Zaburdaev

Vasily Zaburdaev

Professor, Friedrich-Alexander-University Erlangen-Nürnberg
Verified email at fau.de
Cited by 3701

Lévy walks

V Zaburdaev, S Denisov, J Klafter - Reviews of Modern Physics, 2015 - APS
Random walk is a fundamental concept with applications ranging from quantum physics to
econometrics. Remarkably, one specific model of random walks appears to be ubiquitous …

A pH-driven transition of the cytoplasm from a fluid-to a solid-like state promotes entry into dormancy

…, L Malinovska, D Richter, J Guck, V Zaburdaev… - elife, 2016 - elifesciences.org
10.7554/eLife.09347.001 Cells can enter into a dormant state when faced with unfavorable
conditions. However, how cells enter into and recover from this state is still poorly understood…

Liquid transport facilitated by channels in Bacillus subtilis biofilms

JN Wilking, V Zaburdaev, M De Volder… - Proceedings of the …, 2013 - National Acad Sciences
Many bacteria on earth exist in surface-attached communities known as biofilms. These films
are responsible for manifold problems, including hospital-acquired infections and biofouling…

[HTML][HTML] Transcription organizes euchromatin via microphase separation

…, F Jülicher, A Honigmann, V Zaburdaev… - Nature …, 2021 - nature.com
In eukaryotes, DNA is packed inside the cell nucleus in the form of chromatin, which
consists of DNA, proteins such as histones, and RNA. Euchromatin, which is permissive for …

Competition between histone and transcription factor binding regulates the onset of transcription in zebrafish embryos

…, M Pálfy, L Hilbert, M Kumar, J Karschau, V Zaburdaev… - elife, 2017 - elifesciences.org
10.7554/eLife.23326.001 Upon fertilization, the genome of animal embryos remains
transcriptionally inactive until the maternal-to-zygotic transition. At this time, the embryo takes control …

[HTML][HTML] How the motility pattern of bacteria affects their dispersal and chemotaxis

J Taktikos, H Stark, V Zaburdaev - PloS one, 2013 - journals.plos.org
Most bacteria at certain stages of their life cycle are able to move actively; they can swim in
a liquid or crawl on various surfaces. A typical path of the moving cell often resembles the …

A tunable refractive index matching medium for live imaging cells, tissues and model organisms

…, M Heide, L Berninger, WB Huttner, V Zaburdaev… - Elife, 2017 - elifesciences.org
10.7554/eLife.27240.001 In light microscopy, refractive index mismatches between media
and sample cause spherical aberrations that often limit penetration depth and resolution. …

[PDF][PDF] A bacterial swimmer with two alternating speeds of propagation

M Theves, J Taktikos, V Zaburdaev, H Stark, C Beta - Biophysical journal, 2013 - cell.com
We recorded large data sets of swimming trajectories of the soil bacterium Pseudomonas
putida. Like other prokaryotic swimmers, P. putida exhibits a motion pattern dominated by …

RNA polymerase II clusters form in line with surface condensation on regulatory chromatin

…, AY Kobitski, GU Nienhaus, V Zaburdaev… - Molecular systems …, 2021 - embopress.org
It is essential for cells to control which genes are transcribed into RNA. In eukaryotes, two
major control points are recruitment of RNA polymerase II (Pol II) into a paused state, and …

Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis

…, JM Heddleston, TL Chew, V Zaburdaev… - …, 2019 - journals.biologists.com
Histone post-translational modifications are key gene expression regulators, but their rapid
dynamics during development remain difficult to capture. We applied a Fab-based live …