Stochasticity of metabolism and growth at the single-cell level

…, P Nghe, N Walker, S Boulineau, V Sunderlikova… - Nature, 2014 - nature.com
Elucidating the role of molecular stochasticity 1 in cellular growth is central to understanding
phenotypic heterogeneity 2 and the stability of cellular proliferation 3 . The inherent …

Processive extrusion of polypeptide loops by a Hsp100 disaggregase

MJ Avellaneda, KB Franke, V Sunderlikova, B Bukau… - Nature, 2020 - nature.com
The ability to reverse protein aggregation is vital to cells 1 , 2 . Hsp100 disaggregases such
as ClpB and Hsp104 are proposed to catalyse this reaction by translocating polypeptide …

Breaking evolutionary constraint with a tradeoff ratchet

…, A Dawid, V Sunderlikova… - Proceedings of the …, 2015 - National Acad Sciences
Epistatic interactions can frustrate and shape evolutionary change. Indeed, phenotypes may
fail to evolve when essential mutations are only accessible through positive selection if they …

Protein chain collapse modulation and folding stimulation by GroEL-ES

…, A Roth, EJ Koers, A Roland, V Sunderlikova… - Science …, 2022 - science.org
The collapse of polypeptides is thought important to protein folding, aggregation, intrinsic
disorder, and phase separation. However, whether polypeptide collapse is modulated in cells …

Dehydrin genes and their expression in recalcitrant oak (Quercus robur) embryos

V Šunderlíková, J Salaj, D Kopecky, T Salaj, E Wilhem… - Plant cell reports, 2009 - Springer
In this work, three dehydrin genes, QrDhn1, QrDhn2, QrDhn3, were isolated from recalcitrant
oak (Quercus robur). Their expression pattern was analyzed in both zygotic and somatic …

[HTML][HTML] Simultaneous sensing and imaging of individual biomolecular complexes enabled by modular DNA–protein coupling

…, EJ Koers, DP Minde, V Sunderlikova… - Communications …, 2020 - nature.com
Many proteins form dynamic complexes with DNA, RNA, and other proteins, which often
involves protein conformational changes that are key to function. Yet, methods to probe these …

Physiological and morphological characteristics during development of pedunculate oak (Quercus robur L.) zygotic embryos

…, M Endemann, V Reinöhl, J Salaj, V Sunderlikova… - Trees, 2006 - Springer
The developmental stages of oak zygotic embryos (ZEs) are characterized here according
to morphological and physiological features. Seeds were harvested from June to September …

Cytosolic Interactome Protects Against Protein Unfolding in a Single Molecule Experiment

…, V Sheikhhassani, V Sunderlikova… - Advanced …, 2023 - Wiley Online Library
Single molecule techniques are particularly well suited for investigating the processes of
protein folding and chaperone assistance. However, current assays provide only a limited …

High accumulation of legumin and Lea-like mRNAs during maturation is associated with increased conversion frequency of somatic embryos from pedunculate oak …

V Šunderlíková, E Wilhelm - Protoplasma, 2002 - Springer
The expression patterns of the storage protein legumin gene and Em- and dehydrin-like
homologues were investigated in somatic embryos from Quercus robur L. The effect of different …

Isolation and characterization of an embryo-specific Em-like gene of pedunculate oak (Quercus robur L.) and its temporal and spatial expression patterns during …

V Šunderlíková, J Salaj, I Matušíková, E Wilhelm - Trees, 2009 - Springer
The oak Em gene, QrEm, was isolated from Quercus robur L. zygotic embryos in RT-PCR
using degenerate primers. The full-length cDNA was obtained by RACE. Sequence analyses …