User profiles for V. Stathias
Vasileios StathiasUniversity of Miami Verified email at med.miami.edu Cited by 2413 |
[PDF][PDF] The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
The Library of Integrated Network-Based Cellular Signatures (LINCS) is an NIH Common
Fund program that catalogs how human cells globally respond to chemical, genetic, and …
Fund program that catalogs how human cells globally respond to chemical, genetic, and …
[PDF][PDF] Proteogenomic data and resources for pan-cancer analysis
The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium (CPTAC)
investigates tumors from a proteogenomic perspective, creating rich multi-omics datasets …
investigates tumors from a proteogenomic perspective, creating rich multi-omics datasets …
Machine and deep learning approaches for cancer drug repurposing
Abstract Knowledge of the underpinnings of cancer initiation, progression and metastasis has
increased exponentially in recent years. Advanced “omics” coupled with machine learning …
increased exponentially in recent years. Advanced “omics” coupled with machine learning …
[PDF][PDF] A proteogenomic portrait of lung squamous cell carcinoma
Lung squamous cell carcinoma (LSCC) remains a leading cause of cancer death with few
therapeutic options. We characterized the proteogenomic landscape of LSCC, providing a …
therapeutic options. We characterized the proteogenomic landscape of LSCC, providing a …
[PDF][PDF] Proteogenomic and metabolomic characterization of human glioblastoma
Glioblastoma (GBM) is the most aggressive nervous system cancer. Understanding its
molecular pathogenesis is crucial to improving diagnosis and treatment. Integrated analysis of …
molecular pathogenesis is crucial to improving diagnosis and treatment. Integrated analysis of …
[PDF][PDF] Integrated proteogenomic characterization across major histological types of pediatric brain cancer
We report a comprehensive proteogenomics analysis, including whole-genome sequencing,
RNA sequencing, and proteomics and phosphoproteomics profiling, of 218 tumors across 7 …
RNA sequencing, and proteomics and phosphoproteomics profiling, of 218 tumors across 7 …
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response …
The Library of Integrated Network-based Cellular Signatures (LINCS) program is a national
consortium funded by the NIH to generate a diverse and extensive reference library of cell-…
consortium funded by the NIH to generate a diverse and extensive reference library of cell-…
[HTML][HTML] Connecting omics signatures and revealing biological mechanisms with iLINCS
…, JF Reichard, K Roberts, V Stathias… - Nature …, 2022 - nature.com
There are only a few platforms that integrate multiple omics data types, bioinformatics tools,
and interfaces for integrative analyses and visualization that do not require programming …
and interfaces for integrative analyses and visualization that do not require programming …
[PDF][PDF] Pan-cancer proteogenomics connects oncogenic drivers to functional states
Cancer driver events refer to key genetic aberrations that drive oncogenesis; however, their
exact molecular mechanisms remain insufficiently understood. Here, our multi-omics pan-…
exact molecular mechanisms remain insufficiently understood. Here, our multi-omics pan-…
LINCS Data Portal 2.0: next generation access point for perturbation-response signatures
The Library of Integrated Network-Based Cellular Signatures (LINCS) is an NIH Common
Fund program with the goal of generating a large-scale and comprehensive catalogue of …
Fund program with the goal of generating a large-scale and comprehensive catalogue of …