User profiles for T. Tatarinova
Tatiana V. TatarinovaFletcher Jones Endowed Chair in Computational Biology, University of LaVerne Verified email at laverne.edu Cited by 3198 |
Artificial microRNAs (amiRNAs) engineering–On how microRNA-based silencing methods have affected current plant silencing research
In recent years, endogenous microRNAs have been described as important regulators of
gene expression in eukaryotes. Artificial microRNAs (amiRNAs) represent a recently …
gene expression in eukaryotes. Artificial microRNAs (amiRNAs) represent a recently …
[HTML][HTML] Insights into corn genes derived from large-scale cDNA sequencing
…, S Freidin, ME Troukhan, TV Tatarinova… - Plant molecular …, 2009 - Springer
We present a large portion of the transcriptome of Zea mays, including ESTs representing
484,032 cDNA clones from 53 libraries and 36,565 fully sequenced cDNA clones, out of which …
484,032 cDNA clones from 53 libraries and 36,565 fully sequenced cDNA clones, out of which …
[HTML][HTML] DNA barcoding the native flowering plants and conifers of Wales
…, H Davies, J Allainguillaume, S Ronca, T Tatarinova… - PloS one, 2012 - journals.plos.org
We present the first national DNA barcode resource that covers the native flowering plants
and conifers for the nation of Wales (1143 species). Using the plant DNA barcode markers …
and conifers for the nation of Wales (1143 species). Using the plant DNA barcode markers …
[HTML][HTML] Geographic population structure analysis of worldwide human populations infers their biogeographical origins
The search for a method that utilizes biological information to predict humans’ place of origin
has occupied scientists for millennia. Over the past four decades, scientists have employed …
has occupied scientists for millennia. Over the past four decades, scientists have employed …
Features of Arabidopsis Genes and Genome Discovered using Full-length cDNAs
…, ME Troukhan, VV Brover, T Tatarinova… - Plant molecular …, 2006 - Springer
… There are clear peaks of A and T in the promoter region at about 30 nucleotides upstream
of the transcription start site (TATA box; Figure 3A) but not all genes posses canonical TATA …
of the transcription start site (TATA box; Figure 3A) but not all genes posses canonical TATA …
[HTML][HTML] GC3 biology in corn, rice, sorghum and other grasses
TV Tatarinova, NN Alexandrov, JB Bouck… - BMC genomics, 2010 - Springer
Background The third, or wobble, position in a codon provides a high degree of possible
degeneracy and is an elegant fault-tolerance mechanism. Nucleotide biases between …
degeneracy and is an elegant fault-tolerance mechanism. Nucleotide biases between …
Structural variants in 3000 rice genomes
Investigation of large structural variants (SVs) is a challenging yet important task in
understanding trait differences in highly repetitive genomes. Combining different bioinformatic …
understanding trait differences in highly repetitive genomes. Combining different bioinformatic …
Two general methods for population pharmacokinetic modeling: non-parametric adaptive grid and non-parametric Bayesian
… Hence, we consider a one compartment model with T = 5 or 6 serum measurements (specific
for each patient) for a population of N = 35 subjects. In this case \( \theta = (\kappa ,V); \) …
for each patient) for a population of N = 35 subjects. In this case \( \theta = (\kappa ,V); \) …
Toward high-resolution population genomics using archaeological samples
… They also found G and T overrepresented at the 5′ and 3′ ends of break points and …
One estimation strategy for base modification compares the percentage of T and A calls at ultra-…
One estimation strategy for base modification compares the percentage of T and A calls at ultra-…
[HTML][HTML] Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry
…, IV Travinsky, M Tříska, P Tříska, TV Tatarinova - Scientific reports, 2016 - nature.com
… In order to mitigate the effect of ancient DNA deamination and the resulting C to T substitutions
60 , we constructed another version of the genome-based dataset, with all CT and AG …
60 , we constructed another version of the genome-based dataset, with all CT and AG …