User profiles for T. Lingner

Thomas Lingner

Genevention GmbH
Verified email at genevention.com
Cited by 3930

[HTML][HTML] Critical assessment of metagenome interpretation—a benchmark of metagenomics software

…, H Klingenberg, P Meinicke, MD Barton, T Lingner… - Nature …, 2017 - nature.com
Methods for assembly, taxonomic profiling and binning are key to interpreting metagenome
data, but a lack of consensus about benchmarking complicates performance assessment. …

BCI competition 2003-data set IIb: support vector machines for the P300 speller paradigm

…, U Grossekathoefer, T Lingner… - IEEE Transactions …, 2004 - ieeexplore.ieee.org
… Grossekathoefer, T. Lingner, and H. Ritter are with the Faculty of Technology, … Thomas
Lingner is a computer science student within the Neuroinformatics Group, Bielefeld University, …

[HTML][HTML] Characterization, prediction and evolution of plant peroxisomal targeting signals type 1 (PTS1s)

S Reumann, G Chowdhary, T Lingner - Biochimica et Biophysica Acta (BBA …, 2016 - Elsevier
Our knowledge of the proteome of plant peroxisomes and their functional plasticity is far
from being complete, primarily due to major technical challenges in experimental proteome …

Peroxisomal lactate dehydrogenase is generated by translational readthrough in mammals

F Schueren, T Lingner, R George, J Hofhuis, C Dickel… - Elife, 2014 - elifesciences.org
10.7554/eLife.03640.001 Translational readthrough gives rise to low abundance proteins
with C-terminal extensions beyond the stop codon. To identify functional translational …

Enabling technologies towards personalization of scaffolds for large bone defect regeneration

PSP Poh, T Lingner, S Kalkhof, S Märdian… - Current Opinion in …, 2022 - Elsevier
Additive manufacturing (AM) can deliver personalized scaffolds to support large volume
defect tissue regeneration — a major clinical challenge in many medical disciplines. The …

[HTML][HTML] The IL-1 pathway is hyperactive in hidradenitis suppurativa and contributes to skin infiltration and destruction

…, ML Irmer, R Mößner, O Shomroni, T Lingner… - Journal of Investigative …, 2019 - Elsevier
… Finally, the lesional IL-1β expression in HS also exceeded the levels in other skin disorders
such as atopic dermatitis and cutaneous T-cell lymphoma (Figure 1c and data not shown). …

Orphelia: predicting genes in metagenomic sequencing reads

KJ Hoff, T Lingner, P Meinicke, M Tech - Nucleic acids research, 2009 - academic.oup.com
Metagenomic sequencing projects yield numerous sequencing reads of a diverse range of
uncultivated and mostly yet unknown microorganisms. In many cases, these sequencing …

Fear circuit–based neurobehavioral signatures mirror resilience to chronic social stress in mouse

S Ayash, T Lingner, A Ramisch, S Ryu… - Proceedings of the …, 2023 - National Acad Sciences
Consistent evidence from human data points to successful threat–safety discrimination and
responsiveness to extinction of fear memories as key characteristics of resilient individuals. …

Identification of novel plant peroxisomal targeting signals by a combination of machine learning methods and in vivo subcellular targeting analyses

T Lingner, AR Kataya, GE Antonicelli, A Benichou… - The Plant …, 2011 - academic.oup.com
In the postgenomic era, accurate prediction tools are essential for identification of the
proteomes of cell organelles. Prediction methods have been developed for peroxisome-targeted …

[HTML][HTML] Gene prediction in metagenomic fragments: a large scale machine learning approach

KJ Hoff, M Tech, T Lingner, R Daniel, B Morgenstern… - BMC …, 2008 - Springer
… Because not all genes have a potential TIS region we do not use the TIS score s = w T · x T
directly, but instead we take the posterior probabilities of being a TIS or not. For computation …