Did you mean: IS. Morganella

Mutational signatures in breast cancer: the problem at the DNA level

S Nik-Zainal, S Morganella - Clinical Cancer Research, 2017 - AACR
S. Nik-Zainal is listed as a co-inventor on multiple patent filings related to the application of
mutational … S. Morganella is funded by core funds from the Wellcome Trust Sanger Institute. …

Landscape of somatic mutations in 560 breast cancer whole-genome sequences

…, YS Ju, M Smid, AB Brinkman, S Morganella… - Nature, 2016 - nature.com
We analysed whole-genome sequences of 560 breast cancers to advance understanding of
the driver mutations conferring clonal advantage and the mutational processes generating …

[HTML][HTML] The repertoire of mutational signatures in human cancer

…, LJ Klimczak, JR McPherson, S Morganella… - Nature, 2020 - nature.com
… ’s or SigProfiler’s analysis of the PCAWG genome data. SignatureAnalyzer’s reference …
SigProfiler’s reference analysis was based on strand-agnostic SBSs in the context of one 5…

HRDetect is a predictor of BRCA1 and BRCA2 deficiency based on mutational signatures

H Davies, D Glodzik, S Morganella, LR Yates, J Staaf… - Nature medicine, 2017 - nature.com
Approximately 1–5% of breast cancers are attributed to inherited mutations in BRCA1 or
BRCA2 and are selectively sensitive to poly(ADP-ribose) polymerase (PARP) inhibitors. In other …

[PDF][PDF] A compendium of mutational signatures of environmental agents

JE Kucab, X Zou, S Morganella, M Joel, AS Nanda… - Cell, 2019 - cell.com
Whole-genome-sequencing (WGS) of human tumors has revealed distinct mutation patterns
that hint at the causative origins of cancer. We examined mutational signatures in 324 WGS …

[HTML][HTML] The topography of mutational processes in breast cancer genomes

S Morganella, LB Alexandrov, D Glodzik, X Zou… - Nature …, 2016 - nature.com
… Pearson’s correlations were separately applied to assess the relationship between the …
The Pearson’s test showed low P values for strong correlations across replication time. On the …

[HTML][HTML] TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach

P Zoppoli, S Morganella, M Ceccarelli - BMC bioinformatics, 2010 - Springer
… an eleven genes network from yeast S. cerevisiae cell cycle, … Entry into S phase requires
the activation of the protein … activates DNA synthesis genes and S-phase cyclin genes CLB5 …

The genome as a record of environmental exposure

S Nik-Zainal, JE Kucab, S Morganella, D Glodzik… - …, 2015 - academic.oup.com
Whole genome sequencing of human tumours has revealed distinct patterns of mutation
that hint at the causative origins of cancer. Experimental investigations of the mutations and …

A practical framework and online tool for mutational signature analyses show intertissue variation and driver dependencies

…, S Shooter, X Zou, D Glodzik, S Morganella… - Nature cancer, 2020 - nature.com
Mutational signatures are patterns of mutations that arise during tumorigenesis. We present
an enhanced, practical framework for mutational signature analyses. Applying these …

The repertoire of mutational signatures in human cancer

…, LJ Klimczak, JR McPherson, S Morganella… - BioRxiv, 2018 - biorxiv.org
… The mechanism(s) underlying this amplification of transcriptional strand bias in exons is …
We operationally defined "realistic" as corresponding to either SA’s or SP’s analysis of the …
Did you mean to search for: IS. Morganella