[HTML][HTML] Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize
J Yang, S Mezmouk, A Baumgarten, ES Buckler… - PLoS …, 2017 - journals.plos.org
Deleterious alleles have long been proposed to play an important role in patterning phenotypic
variation and are central to commonly held ideas explaining the hybrid vigor observed in …
variation and are central to commonly held ideas explaining the hybrid vigor observed in …
Complex patterns of local adaptation in teosinte
T Pyhäjärvi, MB Hufford, S Mezmouk… - Genome biology and …, 2013 - academic.oup.com
Populations of widely distributed species encounter and must adapt to local environmental
conditions. However, comprehensive characterization of the genetic basis of adaptation is …
conditions. However, comprehensive characterization of the genetic basis of adaptation is …
The pattern and distribution of deleterious mutations in maize
S Mezmouk, J Ross-Ibarra - G3: Genes, Genomes, Genetics, 2014 - academic.oup.com
… is the mean of PH, D is the genetic distance between the tester (B73 or Mo17) and each
inbred line, β is the fixed effect of that distance, H is … the locus, and ε′ is the vector of residuals …
inbred line, β is the fixed effect of that distance, H is … the locus, and ε′ is the vector of residuals …
General and specific combining abilities in a maize (Zea mays L.) test-cross hybrid panel: relative importance of population structure and genetic divergence between …
…, L Moreau, J Laborde, C Bauland, S Mezmouk… - Theoretical and Applied …, 2017 - Springer
Key message General and specific combining abilities of maize hybrids between 288 inbred
lines and three tester lines were highly related to population structure and genetic distance …
lines and three tester lines were highly related to population structure and genetic distance …
[HTML][HTML] Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels
S Mezmouk, P Dubreuil, M Bosio, L Décousset… - Theoretical and applied …, 2011 - Springer
… neutral, the linkage disequilibrium between them is due principally to the panel stratification;
the panel structure is thus the main information that is summarized by the first components. …
the panel structure is thus the main information that is summarized by the first components. …
[HTML][HTML] How do the type of QTL effect and the form of the residual term influence QTL detection in multi-parent populations? A case study in the maize EU-NAM …
… The more diverse the population is, the more heterogeneous the residual variance is
expected to be. The heterogeneity of the residual genetic variance may depend on the level of …
expected to be. The heterogeneity of the residual genetic variance may depend on the level of …
metaGE: Investigating Genotype× Environment interactions through meta-analysis
… Arabidopis QTL5.220 is located in the AtCNGC4 genomic region that is well-known to affect
floral transition [12, 22]. In addition, AtCNGC4 impairs plant immunity [22, 54], which is in line …
floral transition [12, 22]. In addition, AtCNGC4 impairs plant immunity [22, 54], which is in line …
CNVmap: a method and software to detect and map copy number variants from segregation data
… intensity is associated with each allele of a SNP; by following these intensities for successive
SNPs along the genome, it is possible to identify regions in which the signal is anomalously …
SNPs along the genome, it is possible to identify regions in which the signal is anomalously …
Correction: Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize
J Yang, S Mezmouk, A Baumgarten, ES Buckler… - PLoS …, 2021 - journals.plos.org
Fig 1. Heterosis and deleterious variants.(a) Boxplots (median and interquartile range) of
percent mid-parent heterosis (MPH).(b) Proportion of deleterious alleles in landraces (LR, …
percent mid-parent heterosis (MPH).(b) Proportion of deleterious alleles in landraces (LR, …
[PDF][PDF] CNVmap: a method and software to detect copy number variants from linkage mapping data
… The wide availability of such tools explains why polymorphisms are principally characterized
at this SNP level, even though it is known in many species that there is also a great deal of …
at this SNP level, even though it is known in many species that there is also a great deal of …