Evolution of V genes from the TRV loci of mammals

DN Olivieri, S Gambón-Cerdá, F Gambón-Deza - Immunogenetics, 2015 - Springer
… In this study, we show that the diversification of V genes found in Primates is common in all
Eutheria and different in Monotremes and Marsupials. Independent of their diversification, all …

V genes in rodents from whole genome sequencing data

DN Olivieri, S Gambón-Cerdá, F Gambón-Deza - bioRxiv, 2014 - biorxiv.org
… As compared with other mammals, there is an increase in the number of TRAV genes within
rodents. Such an increase within this locus is caused by duplication events involving a few …

Immunoglobulins, MHC and T Cell receptors genes in Cetaceans

F Gambón-Deza - bioRxiv, 2020 - biorxiv.org
… It is studied the changes that have occurred in … An exception is the IgD gene, which is
composed of three CH … The number of Vλ genes is greater than that of Vκ. In the genes for T …

[PDF][PDF] Iterative Variable Gene Discovery from Whole Genome Sequencing with a Bootstrapped Multiresolution Algorithm.

DN Olivieri, F Gambon-Deza - Comput. Math. Methods …, 2019 - downloads.hindawi.com
is iterative learning/discovery process terminates when the number of new sequences
discovered is negligible. is process is akin to “online” or reinforcement learning and is proven to …

Comparative genomics of the T cell receptor μ locus in marsupials and monotremes

KA Morrissey, MR Stammnitz, E Murchison, RD Miller - Immunogenetics, 2023 - Springer
… (s) or other rightsholder(s); author self-archiving of the accepted manuscript version of
this article is solely governed by the terms of such publishing agreement and applicable law. …

[HTML][HTML] Comparative genomic analysis and evolution of the T cell receptor loci in the opossum Monodelphis domestica

ZE Parra, ML Baker, J Hathaway, AM Lopez, J Trujillo… - BMC genomics, 2008 - Springer
… Cyclin A2 is also associated with the cow TRB locus but is not in human, mouse or chicken.
This is consistent with the cyclin A2 gene being inserted near the TRB DJC cassettes prior to …

Macroevolution of avian T cell receptor C segments using genomic data

C Liang, L Sun, Y Zhu, A Zhao, H Liu, K He - Immunogenetics, 2023 - Springer
is a galliform-specific event, or whether the TCR locus is duplicated in birds as in crocodiles,
as birds and crocodiles are sister groups within archosaurs. These questions may be …

Endogenous hepadnaviruses, bornaviruses and circoviruses in snakes

…, DC Card, TA Castoe, S Schaack - … of the Royal …, 2014 - royalsocietypublishing.org
We report the discovery of endogenous viral elements (EVEs) from Hepadnaviridae, Bornaviridae
and Circoviridae in the speckled rattlesnake, Crotalus mitchellii, the first viperid snake …

[HTML][HTML] A comprehensive analysis of the germline and expressed TCR repertoire in White Peking duck

Z Yang, Y Sun, Y Ma, Z Li, Y Zhao, L Ren, H Han… - Scientific Reports, 2017 - nature.com
… Moreover, the duck is not only one of the most economically important waterfowl, but is also
a particularly good animal model for research in immunology because it serves as a natural …

The variations of TRBV genes usages in the peripheral blood of a healthy population are associated with their evolution and single nucleotide polymorphisms

X Mao, X Chen, Y Jin, J Cui, Y Pan, C Lai, K Lin… - Human Immunology, 2019 - Elsevier
… Each chain is composed of two extracellular domains: a Variable (V) region and a Constant
(C) region. The Constant region is proximal to the cell membrane and is followed by a …