User profiles for S. Denil

Simon LIJ Denil

VITO - Unit Health
Verified email at vito.be
Cited by 1549

Next‐generation technologies and data analytical approaches for epigenomics

K Mensaert, S Denil, G Trooskens… - Environmental and …, 2014 - Wiley Online Library
… Indeed, much is expected from the next generation(s) of sequencers, which envisage
single-molecule sequencing at an even lower cost and higher speed, and the direct measurement …

Lgr5-expressing chief cells drive epithelial regeneration and cancer in the oxyntic stomach

…, LT Tan, J Goh, E Wong, SLIJ Denil… - Nature cell …, 2017 - nature.com
… ’s instructions. cDNA was generated using Superscript III (Life Technologies) according to the
manufacturer’s … We thank S. Srivastava for analysing and confirming a SPEM phenotype of …

Transcriptional reprogramming by root knot and migratory nematode infection in rice

T Kyndt, S Denil, A Haegeman, G Trooskens… - New …, 2012 - Wiley Online Library
… An induction of oxidative stress is exemplified by the up-regulation of three peroxidase
precursors and two glutathione S-transferases… Simon Denil is supported by an IWT doctoral grant. …

Transcriptional analysis through RNA sequencing of giant cells induced by Meloidogyne graminicola in rice roots

H Ji, G Gheysen, S Denil, K Lindsey… - Journal of …, 2013 - academic.oup.com
… Infected and control roots were collected at 7 and 14 dai and fixed in Farmer’s fixative (3:1
ethanol/acetic acid). The material was dehydrated in ethanol and then cryosectioned with a …

AQP5 enriches for stem cells and cancer origins in the distal stomach

…, S Srivastava, M Teh, SLIJ Denil, S Mustafah… - Nature, 2020 - nature.com
… Rapiclear (Sunjin laboratory) was used to clear whole-mount tissues and vibratome sections
according to the manufacturer’s instructions. Hoescht was used as a nuclear counterstain. …

Metabolic pathway analyses identify proline biosynthesis pathway as a promoter of liver tumorigenesis

…, N Escande-Beillard, QY Lee, A Loh, S Denil… - Journal of …, 2020 - Elsevier
… The PCR conditions were as follows: 95C for 10 min for initial enzyme activation and 40
cycles of amplification at 95C for 15 s and 60C for 1 min. Ct values were exported for web-based …

[PDF][PDF] Long-term culture of self-renewing pancreatic progenitors derived from human pluripotent stem cells

J Trott, EK Tan, S Ong, DM Titmarsh, SLIJ Denil… - Stem cell reports, 2017 - cell.com
… modifications: (1) cells were initially seeded into 12-well plates (Corning, 353043) at a
density of 106 cells/well, and (2) stage 1 was extended to 3 days by repeating the final day’s

[HTML][HTML] Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3

…, H Hollema, W Van Criekinge, T De Meyer, S Denil… - Clinical …, 2016 - Springer
… Condition of the MSP was 10 min hot-start at 95 C; 95 C for 60 s, 60 C for 60 s, and 72 C
60 s for a total of 40 cycles, with a final elongation step of 7 min at 72 C. Leukocyte DNA from …

[HTML][HTML] H3K4me3 remodeling induced acquired resistance through O-GlcNAc transferase

…, N Bordag, A Al Emran, M Giam, S Denil… - Drug Resistance …, 2023 - Elsevier
… WM164 parent, IDTC colonies and dabrafenib resistant cells were fixed using 4%
paraformaldehyde for 10 min followed by chromatin preparation according to the manufacturer’s

Array-based sequencing of filaggrin gene for comprehensive detection of disease-associated variants

XFCC Wong, SLIJ Denil, JN Foo, H Chen… - Journal of Allergy and …, 2018 - jacionline.org
… E2 in this article’s Online Repository at www. jacionline. org). … E2 in this article’s Online
Repository at www. jacionline. org). … in this article’s Online Repository at www. jacionline. org). …