User profiles for S. W. Cheetham
 | Seth CheethamUniversity of Queensland Verified email at uq.edu.au Cited by 1788 |
[HTML][HTML] Long noncoding RNAs and the genetics of cancer
SW Cheetham, F Gruhl, JS Mattick… - British journal of cancer, 2013 - nature.com
Cancer is a disease of aberrant gene expression. While the genetic causes of cancer have
been intensively studied, it is becoming evident that a large proportion of cancer susceptibility …
been intensively studied, it is becoming evident that a large proportion of cancer susceptibility …
Overcoming challenges and dogmas to understand the functions of pseudogenes
Pseudogenes are defined as regions of the genome that contain defective copies of genes.
They exist across almost all forms of life, and in mammalian genomes are annotated in …
They exist across almost all forms of life, and in mammalian genomes are annotated in …
Vasculature organotropism in drug delivery
Over the past decades, there has been an exponential increase in the development of
preclinical and clinical nanodelivery systems, and recently, an accelerating demand to deliver …
preclinical and clinical nanodelivery systems, and recently, an accelerating demand to deliver …
[PDF][PDF] Nanopore sequencing enables comprehensive transposable element epigenomic profiling
Transposable elements (TEs) drive genome evolution and are a notable source of
pathogenesis, including cancer. While CpG methylation regulates TE activity, the locus-specific …
pathogenesis, including cancer. While CpG methylation regulates TE activity, the locus-specific …
Cell-type-specific profiling of protein–DNA interactions without cell isolation using targeted DamID with next-generation sequencing
… Cheetham, W. Gruhn, A. Surani and AHB, data not shown). … Owen J Marshall, Tony D
Southall, Seth W Cheetham & Andrea H Brand … Seth W Cheetham …
Southall, Seth W Cheetham & Andrea H Brand … Seth W Cheetham …
[HTML][HTML] LINE-1 evasion of epigenetic repression in humans
…, RL Troskie, JS Jesuadian, SW Cheetham… - Molecular cell, 2019 - cell.com
Epigenetic silencing defends against LINE-1 (L1) retrotransposition in mammalian cells.
However, the mechanisms that repress young L1 families and how L1 escapes to cause …
However, the mechanisms that repress young L1 families and how L1 escapes to cause …
[HTML][HTML] mRNA vaccine quality analysis using RNA sequencing
…, E Ariens, JR Peters, T Wong, SW Cheetham… - Nature …, 2023 - nature.com
The success of mRNA vaccines has been realised, in part, by advances in manufacturing
that enabled billions of doses to be produced at sufficient quality and safety. However, mRNA …
that enabled billions of doses to be produced at sufficient quality and safety. However, mRNA …
Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non …
DK Gascoigne, SW Cheetham, PB Cattenoz… - …, 2012 - academic.oup.com
Motivation: Comparing transcriptomic data with proteomic data to identify protein-coding
sequences is a long-standing challenge in molecular biology, one that is exacerbated by the …
sequences is a long-standing challenge in molecular biology, one that is exacerbated by the …
Methylartist: tools for visualizing modified bases from nanopore sequence data
SW Cheetham, M Kindlova, AD Ewing - Bioinformatics, 2022 - academic.oup.com
… Seth W Cheetham … Cheetham and Michaela Kindlova should be regarded as Joint
First Authors. … Cheetham and Michaela Kindlova should be regarded as Joint First Authors. …
First Authors. … Cheetham and Michaela Kindlova should be regarded as Joint First Authors. …
[HTML][HTML] Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome
Pseudogenes are gene copies presumed to mainly be functionless relics of evolution due to
acquired deleterious mutations or transcriptional silencing. Using deep full-length PacBio …
acquired deleterious mutations or transcriptional silencing. Using deep full-length PacBio …