User profiles for S. J. Eglen

Stephen J. Eglen

Cambridge University
Verified email at cam.ac.uk
Cited by 3392

Development of retinal ganglion cell structure and function

E Sernagor, SJ Eglen, ROL Wong - Progress in retinal and eye research, 2001 - Elsevier
In this review, we summarize the main stages of structural and functional development of
retinal ganglion cells (RGCs). We first consider the various mechanisms that are involved in …

From random to regular: Variation in the patterning of retinal mosaics

PW Keeley, SJ Eglen, BE Reese - Journal of Comparative …, 2020 - Wiley Online Library
The various types of retinal neurons are each positioned at their respective depths within
the retina where they are believed to be assembled as orderly mosaics, in which like‐type …

Detecting pairwise correlations in spike trains: an objective comparison of methods and application to the study of retinal waves

CS Cutts, SJ Eglen - Journal of Neuroscience, 2014 - Soc Neuroscience
Correlations in neuronal spike times are thought to be key to processing in many neural
systems. Many measures have been proposed to summarize these correlations and of these the …

Developmental loss of synchronous spontaneous activity in the mouse retina is independent of visual experience

J Demas, SJ Eglen, ROL Wong - Journal of Neuroscience, 2003 - Soc Neuroscience
… Young, and SJ Eglen, unpublished observations). It is not yet known how the vertical and
lateral circuits act together to decouple the activity of RGCs, but our current findings suggest …

[HTML][HTML] Ten simple rules for taking advantage of Git and GitHub

…, C Fufezan, T Ternent, SJ Eglen… - PLoS computational …, 2016 - journals.plos.org
Bioinformatics is a broad discipline in which one common denominator is the need to produce
and/or use software that can be applied to biological data in different contexts. To enable …

Following the ontogeny of retinal waves: Pan‐retinal recordings of population dynamics in the neonatal mouse

…, J van Coppenhagen, SJ Eglen… - The Journal of …, 2014 - Wiley Online Library
Key points Novel pan‐retinal recordings of mouse retinal waves were obtained at near
cellular resolution using a large‐scale, high‐density array of 4096 electrodes to investigate …

Toward standard practices for sharing computer code and programs in neuroscience

SJ Eglen, B Marwick, YO Halchenko, M Hanke… - Nature …, 2017 - nature.com
Computational techniques are central in many areas of neuroscience and are relatively easy
to share. This paper describes why computer programs underlying scientific publications …

[HTML][HTML] Ten simple rules for writing Dockerfiles for reproducible data science

D Nüst, V Sochat, B Marwick, SJ Eglen… - PLoS computational …, 2020 - journals.plos.org
Computational science has been greatly improved by the use of containers for packaging
software and data dependencies. In a scholarly context, the main drivers for using these …

[HTML][HTML] Functional characterization of human pluripotent stem cell-derived cortical networks differentiated on laminin-521 substrate: comparison to rat cortical cultures

…, FE Kapucu, L Aarnos, A Vinogradov, SJ Eglen… - Scientific reports, 2019 - nature.com
Human pluripotent stem cell (hPSC)-derived neurons provide exciting opportunities for in
vitro modeling of neurological diseases and for advancing drug development and …

[HTML][HTML] Causality indices for bivariate time series data: A comparative review of performance

T Edinburgh, SJ Eglen, A Ercole - Chaos: An Interdisciplinary Journal …, 2021 - pubs.aip.org
Inferring nonlinear and asymmetric causal relationships between multivariate longitudinal
data is a challenging task with wide-ranging application areas including clinical medicine, …