Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies
In genome-wide association studies (GWAS) for thousands of phenotypes in large biobanks,
most binary traits have substantially fewer cases than controls. Both of the widely used …
most binary traits have substantially fewer cases than controls. Both of the widely used …
[HTML][HTML] Picomolar concentrations of oligomeric alpha-synuclein sensitizes TLR4 to play an initiating role in Parkinson's disease pathogenesis
Despite the wealth of genomic and transcriptomic data in Parkinson’s disease (PD), the initial
molecular events are unknown. Using LD score regression analysis, we show significant …
molecular events are unknown. Using LD score regression analysis, we show significant …
Genomics implicates adaptive and innate immunity in Alzheimer's and Parkinson's diseases
SA Gagliano, JG Pouget, J Hardy… - Annals of clinical …, 2016 - Wiley Online Library
Objectives We assessed the current genetic evidence for the involvement of various cell
types and tissue types in the etiology of neurodegenerative diseases, especially in relation to …
types and tissue types in the etiology of neurodegenerative diseases, especially in relation to …
Long‐and short‐term outcomes in renal allografts with deceased donors: a large recipient and donor genome‐wide association study
…, J Feehally, S Fuggle, SA Gagliano… - American Journal of …, 2018 - Wiley Online Library
Improvements in immunosuppression have modified short‐term survival of deceased‐donor
allografts, but not their rate of long‐term failure. Mismatches between donor and recipient …
allografts, but not their rate of long‐term failure. Mismatches between donor and recipient …
A genome-wide association study of suicide severity scores in bipolar disorder
Background Suicide claims one million lives worldwide annually, making it a serious public
health concern. The risk for suicidal behaviour can be partly explained by genetic factors, as …
health concern. The risk for suicidal behaviour can be partly explained by genetic factors, as …
Rare coding variants in ten genes confer substantial risk for schizophrenia
Rare coding variation has historically provided the most direct connections between gene
function and disease pathogenesis. By meta-analysing the whole exomes of 24,248 …
function and disease pathogenesis. By meta-analysing the whole exomes of 24,248 …
Exploring and visualizing large-scale genetic associations by using PheWeb
To the Editor—Advances in genotyping and sequencing technologies, the growing
availability of electronic health records for research use and the emergence of population-scale …
availability of electronic health records for research use and the emergence of population-scale …
It's all in the brain: a review of available functional genomic annotations
SA Gagliano - Biological psychiatry, 2017 - Elsevier
What makes the molecular study of psychiatric and other neurological conditions particularly
challenging compared with other complex traits is the difficulty of accessing the relevant …
challenging compared with other complex traits is the difficulty of accessing the relevant …
Scalable generalized linear mixed model for region-based association tests in large biobanks and cohorts
…, LG Fritsche, J LeFaive, SA Gagliano Taliun… - Nature …, 2020 - nature.com
With very large sample sizes, biobanks provide an exciting opportunity to identify genetic
components of complex traits. To analyze rare variants, region-based multiple-variant …
components of complex traits. To analyze rare variants, region-based multiple-variant …
[HTML][HTML] A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization
The increasing quantity and quality of functional genomic information motivate the assessment
and integration of these data with association data, including data originating from …
and integration of these data with association data, including data originating from …