The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
The concordance of RNA-sequencing (RNA-seq) with microarrays for genome-wide analysis
of differential gene expression has not been rigorously assessed using a range of chemical …
of differential gene expression has not been rigorously assessed using a range of chemical …
Minerva and minepy: a C engine for the MINE suite and its R, Python and MATLAB wrappers
D Albanese, M Filosi, R Visintainer… - …, 2013 - academic.oup.com
We introduce a novel implementation in ANSI C of the MINE family of algorithms for computing
maximal information-based measures of dependence between two variables in large …
maximal information-based measures of dependence between two variables in large …
[PDF][PDF] Landscape of conditional eQTL in dorsolateral prefrontal cortex and co-localization with schizophrenia GWAS
…, JMJ Derry, KK Dang, SK Sieberts, R Visintainer… - The American Journal of …, 2018 - cell.com
Causal genes and variants within genome-wide association study (GWAS) loci can be
identified by integrating GWAS statistics with expression quantitative trait loci (eQTL) and …
identified by integrating GWAS statistics with expression quantitative trait loci (eQTL) and …
[PDF][PDF] Canberra distance on ranked lists
G Jurman, S Riccadonna, R Visintainer… - Proceedings of advances …, 2009 - Citeseer
The Canberra distance is the sum of absolute values of the differences between ranks divided
by their sum, thus it is a weighted version of the L1 distance. As a metric on permutation …
by their sum, thus it is a weighted version of the L1 distance. As a metric on permutation …
mlpy: Machine learning python
D Albanese, R Visintainer, S Merler… - arXiv preprint arXiv …, 2012 - arxiv.org
mlpy is a Python Open Source Machine Learning library built on top of NumPy/SciPy and
the GNU Scientific Libraries. mlpy provides a wide range of state-of-the-art machine learning …
the GNU Scientific Libraries. mlpy provides a wide range of state-of-the-art machine learning …
pBO-2GP-3B: A batch parallel known/unknown constrained Bayesian optimization with feasibility classification and its applications in computational fluid dynamics
…, JM Furlan, KV Pagalthivarthi, RJ Visintainer… - Computer Methods in …, 2019 - Elsevier
In this work, we present a constrained batch-parallel Bayesian optimization (BO) framework,
termed pBO-2GP-3B, to accelerate the optimization process for high-dimensional and …
termed pBO-2GP-3B, to accelerate the optimization process for high-dimensional and …
Erosion–corrosion performance of high-Cr cast iron alloys in flowing liquid–solid slurries
HH Tian, GR Addie, RJ Visintainer - Wear, 2009 - Elsevier
In many slurry transportation systems, such as in FGD (Flue Gas Desulphurization) and
chemical processing applications, corrosion and erosion are the two main mechanisms of …
chemical processing applications, corrosion and erosion are the two main mechanisms of …
The HIM glocal metric and kernel for network comparison and classification
Comparing and classifying graphs represent two essential steps for network analysis,
across different scientific and applicative domains. Here we deal with both operations by …
across different scientific and applicative domains. Here we deal with both operations by …
WearGP: A computationally efficient machine learning framework for local erosive wear predictions via nodal Gaussian processes
A Tran, JM Furlan, KV Pagalthivarthi, RJ Visintainer… - Wear, 2019 - Elsevier
… 30a and b show the coefficient of determination R 2 between WearGP and CFD wear
predictions for slurry pump impeller, using ( H , Q , d 50 , C v ) and ( H , % BEPQ , d 50 , C v ) basis, …
predictions for slurry pump impeller, using ( H , Q , d 50 , C v ) and ( H , % BEPQ , d 50 , C v ) basis, …
Development of A-scan ultrasound technique for measuring local particle concentration in slurry flows
…, V Mundla, J Kadambi, N Hoyt, R Visintainer… - Powder technology, 2012 - Elsevier
The effects of solid particle concentration on hydraulic performance and wear need to be
considered during the design of slurry transport equipment used in the petroleum and mining …
considered during the design of slurry transport equipment used in the petroleum and mining …