User profiles for R. Durbin

Richard Durbin

Dept of Genetics, University of Cambridge
Verified email at cam.ac.uk
Cited by 306443

InterPro, progress and status in 2005

…, R Copley, E Courcelle, U Das, R Durbin… - Nucleic acids …, 2005 - academic.oup.com
InterPro, an integrated documentation resource of protein families, domains and functional
sites, was created to integrate the major protein signature databases. Currently, it includes …

A large genome center's improvements to the Illumina sequencing system

…, F Smith, A Scally, PJ Stephens, R Durbin… - Nature …, 2008 - nature.com
The Wellcome Trust Sanger Institute is one of the world's largest genome centers, and a
substantial amount of our sequencing is performed with 'next-generation' massively parallel …

An overview of Ensembl

…, KC Woodwark, G Cameron, R Durbin… - Genome …, 2004 - genome.cshlp.org
Ensembl ( http://www.ensembl.org/ ) is a bioinformatics project to organize biological
information around the sequences of large genomes. It is a comprehensive source of stable …

[BOOK][B] Biological sequence analysis: probabilistic models of proteins and nucleic acids

R Durbin, SR Eddy, A Krogh, G Mitchison - 1998 - books.google.com
Probabilistic models are becoming increasingly important in analysing the huge amount of
data being produced by large-scale DNA-sequencing efforts such as the Human Genome …

The complete sequence of a human genome

…, CS Chin, W Chow, LG de Lima, PC Dishuck, R Durbin… - Science, 2022 - science.org
Since its initial release in 2000, the human reference genome has covered only the
euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. …

The variant call format and VCFtools

…, GT Marth, ST Sherry, G McVean, R Durbin… - …, 2011 - academic.oup.com
The variant call format (VCF) is a generic format for storing DNA polymorphism data such as
SNPs, insertions, deletions and structural variants, together with rich annotations. VCF is …

The Pfam protein families database

A Bateman, L Coin, R Durbin, RD Finn… - Nucleic acids …, 2004 - academic.oup.com
Pfam is a large collection of protein families and domains. Over the past 2 years the number
of families in Pfam has doubled and now stands at 6190 (version 10.0). Methodology …

[HTML][HTML] Towards complete and error-free genome assemblies of all vertebrate species

…, J Korlach, HA Lewin, K Howe, EW Myers, R Durbin… - Nature, 2021 - nature.com
High-quality and complete reference genome assemblies are fundamental for the application
of genomics to biology, disease, and biodiversity conservation. However, such assemblies …

Systematic functional analysis of the Caenorhabditis elegans genome using RNAi

RS Kamath, AG Fraser, Y Dong, G Poulin, R Durbin… - Nature, 2003 - nature.com
A principal challenge currently facing biologists is how to connect the complete DNA sequence
of an organism to its development and behaviour. Large-scale targeted-deletions have …

Pfam: clans, web tools and services

…, S Moxon, M Marshall, A Khanna, R Durbin… - Nucleic acids …, 2006 - academic.oup.com
Pfam is a database of protein families that currently contains 7973 entries (release 18.0). A
recent development in Pfam has enabled the grouping of related families into clans. Pfam …