User profiles for R. C. Hardison

Ross C. Hardison

Professor Emeritus of Biochemistry and Molecular Biology, The Pennsylvania State …
Verified email at psu.edu
Cited by 80754

Defining functional DNA elements in the human genome

…, Z Weng, KP White, RC Hardison - Proceedings of the …, 2014 - National Acad Sciences
With the completion of the human genome sequence, attention turned to identifying and
annotating its functional DNA elements. As a complement to genetic and comparative genomics …

[HTML][HTML] Comparative genomics

RC Hardison - PLoS biology, 2003 - journals.plos.org
… Ross C Hardison … Ross C Hardison … Regions of noncoding DNA with a particularly
high similarity among species have long been recognized as good candidates for functional …

Conserved noncoding sequences are reliable guides to regulatory elements

RC Hardison - Trends in Genetics, 2000 - cell.com
A ‘working draft' of the human genome sequence is now available. Comparisons with the
sequences of mouse and other species will be a powerful approach to identifying functional …

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

…, S Batzoglou, N Goldman, RC Hardison… - nature, 2007 - nature.com
We report the generation and analysis of functional data from multiple, diverse experiments
performed on a targeted 1% of the human genome as part of the pilot phase of the ENCODE …

Galaxy: a platform for interactive large-scale genome analysis

B Giardine, C Riemer, RC Hardison, R Burhans… - Genome …, 2005 - genome.cshlp.org
Accessing and analyzing the exponentially expanding genomic sequence and functional
data pose a challenge for biomedical researchers. Here we describe an interactive system, …

[HTML][HTML] Expanded encyclopaedias of DNA elements in the human and mouse genomes

…, MP Snyder, BE Bernstein, B Wold, RC Hardison… - Nature, 2020 - nature.com
The human and mouse genomes contain instructions that specify RNAs and proteins and
govern the timing, magnitude, and cellular context of their production. To better delineate these …

Human–mouse alignments with BLASTZ

…, A Smit, Z Zhang, R Baertsch, RC Hardison… - Genome …, 2003 - genome.cshlp.org
The Mouse Genome Analysis Consortium aligned the human and mouse genome sequences
for a variety of purposes, using alignment programs that suited the various needs. For …

[HTML][HTML] A comparative encyclopedia of DNA elements in the mouse genome

…, R Guigo, TR Gingeras, DM Gilbert, RC Hardison… - Nature, 2014 - nature.com
The laboratory mouse shares the majority of its protein-coding genes with humans, making
it the premier model organism in biomedical research, yet the two mammals differ in …

Evolutionary and biomedical insights from the rhesus macaque genome

…, CD Bustamante, EE Eichler, MW Hahn, RC Hardison… - science, 2007 - science.org
The rhesus macaque (Macaca mulatta) is an abundant primate species that diverged from
the ancestors of Homo sapiens about 25 million years ago. Because they are genetically and …

[HTML][HTML] Topologically associating domains are stable units of replication-timing regulation

…, JA Stamatoyannopoulos, J Taylor, RC Hardison… - Nature, 2014 - nature.com
Eukaryotic chromosomes replicate in a temporal order known as the replication-timing
program 1 . In mammals, replication timing is cell-type-specific with at least half the genome …