User profiles for P. Tataru
Paula TataruSenior Bioinformatics Scientist, Qiagen Verified email at qiagen.com Cited by 599 |
Statistical inference in the Wright–Fisher model using allele frequency data
P Tataru, M Simonsen, T Bataillon… - Systematic …, 2017 - academic.oup.com
… Here, |${\rm Bin}(n,\, p)$| is the binomial distribution with sample size |$n$| and probability
|$… The truncated normal, beta and beta with spikes are discretized as in Tataru et al. (2015). …
|$… The truncated normal, beta and beta with spikes are discretized as in Tataru et al. (2015). …
[HTML][HTML] Cable bacteria with electric connection to oxygen attract flocks of diverse bacteria
…, AJ Mueller, S Brokjær, CA Thorup, P Tataru… - Nature …, 2023 - nature.com
Cable bacteria are centimeter-long filamentous bacteria that conduct electrons via internal
wires, thus coupling sulfide oxidation in deeper, anoxic sediment with oxygen reduction in …
wires, thus coupling sulfide oxidation in deeper, anoxic sediment with oxygen reduction in …
Inference of distribution of fitness effects and proportion of adaptive substitutions from polymorphism data
… correlation between the proportion of beneficial mutations p b and their scaled selection
coefficient S b (Figure S4 in File S1). This illustrates the fact that p b and S b are difficult to …
coefficient S b (Figure S4 in File S1). This illustrates the fact that p b and S b are difficult to …
Long-distance electron transport in individual, living cable bacteria
… n = 10 filaments (1,143 spectra, Shapiro–Wilk test P value: 0.117, t-test P value: 0.000517)
and n = 5 control filaments (852 spectra, Shapiro–Wilk test P value: 0.84, t-test P value: 0.879)…
and n = 5 control filaments (852 spectra, Shapiro–Wilk test P value: 0.84, t-test P value: 0.879)…
Comparison of the full distribution of fitness effects of new amino acid mutations across great apes
… additive deleterious mutations (s ≤ 0), b is the shape parameter of the deleterious DFE, S
b is the mean population scaled selection coefficient of new additive beneficial mutations, p b …
b is the mean population scaled selection coefficient of new additive beneficial mutations, p b …
polyDFEv2. 0: testing for invariance of the distribution of fitness effects within and across species
P Tataru, T Bataillon - Bioinformatics, 2019 - academic.oup.com
Distribution of fitness effects (DFE) of mutations can be inferred from site frequency spectrum
(SFS) data. There is mounting interest to determine whether distinct genomic regions and/…
(SFS) data. There is mounting interest to determine whether distinct genomic regions and/…
[HTML][HTML] Evolving stochastic context-free grammars for RNA secondary structure prediction
… as P b b ̂ → a P a â â for nucleotides a , â , b , b ̂ ). This suggested that a computational
search of a large space of grammars might find stronger grammars, which is what we have …
search of a large space of grammars might find stronger grammars, which is what we have …
Inference under a Wright-Fisher model using an accurate beta approximation
The large amount and high quality of genomic data available today enable, in principle,
accurate inference of evolutionary histories of observed populations. The Wright-Fisher model is …
accurate inference of evolutionary histories of observed populations. The Wright-Fisher model is …
[HTML][HTML] Conjunctival flap surgery in the management of ocular surface disease
M Zemba, AC Stamate, CP Tataru… - Experimental and …, 2020 - spandidos-publications.com
Literature regarding conjunctival flap surgery was reviewed to describe and discuss the
rationale for this type of procedure. The conjunctival flap is an acknowledged surgery for the …
rationale for this type of procedure. The conjunctival flap is an acknowledged surgery for the …
[HTML][HTML] Update on surgical management of corneal ulceration and perforation
AC Stamate, CP Tătaru, M Zemba - Romanian journal of …, 2019 - ncbi.nlm.nih.gov
Corneal ulcerations are a medical emergency, and in recalcitrant cases, leading to
perforation, a surgical ophthalmological emergency. The urgency of the treatment is dictated …
perforation, a surgical ophthalmological emergency. The urgency of the treatment is dictated …