User profiles for P. A. Khavari
Paul KhavariStanford University Verified email at stanford.edu Cited by 28694 |
Integrating single-cell and spatial transcriptomics to elucidate intercellular tissue dynamics
SK Longo, MG Guo, AL Ji, PA Khavari - Nature Reviews Genetics, 2021 - nature.com
Single-cell RNA sequencing (scRNA-seq) identifies cell subpopulations within tissue but
does not capture their spatial distribution nor reveal local networks of intercellular …
does not capture their spatial distribution nor reveal local networks of intercellular …
The functions and unique features of long intergenic non-coding RNA
JD Ransohoff, Y Wei, PA Khavari - Nature reviews Molecular cell …, 2018 - nature.com
Long intergenic non-coding RNA (lincRNA) genes have diverse features that distinguish
them from mRNA-encoding genes and exercise functions such as remodelling chromatin and …
them from mRNA-encoding genes and exercise functions such as remodelling chromatin and …
Advances in skin grafting and treatment of cutaneous wounds
BK Sun, Z Siprashvili, PA Khavari - Science, 2014 - science.org
The ability of the skin to repair itself after injury is vital to human survival and is disrupted in
a spectrum of disorders. The process of cutaneous wound healing is complex, requiring a …
a spectrum of disorders. The process of cutaneous wound healing is complex, requiring a …
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
We present Omni-ATAC, an improved ATAC-seq protocol for chromatin accessibility
profiling that works across multiple applications with substantial improvement of signal-to-…
profiling that works across multiple applications with substantial improvement of signal-to-…
Conjugation of arginine oligomers to cyclosporin A facilitates topical delivery and inhibition of inflammation
…, E Kreider, PL McGrane, PA Wender, PA Khavari - Nature medicine, 2000 - nature.com
Many systemically effective drugs such as cyclosporin A are ineffective topically because of
their poor penetration into skin. To surmount this problem, we conjugated a heptamer of …
their poor penetration into skin. To surmount this problem, we conjugated a heptamer of …
[HTML][HTML] Multimodal analysis of composition and spatial architecture in human squamous cell carcinoma
To define the cellular composition and architecture of cutaneous squamous cell carcinoma (cSCC),
we combined single-cell RNA sequencing with spatial transcriptomics and …
we combined single-cell RNA sequencing with spatial transcriptomics and …
Purification and biochemical heterogeneity of the mammalian SWI‐SNF complex.
We have purified distinct complexes of nine to 12 proteins [referred to as BRG1‐associated
factors (BAFs)] from several mammalian cell lines using an antibody to the SWI2‐SNF2 …
factors (BAFs)] from several mammalian cell lines using an antibody to the SWI2‐SNF2 …
Control of somatic tissue differentiation by the long non-coding RNA TINCR
Several of the thousands of human long non-coding RNAs (lncRNAs) have been
functionally characterized 1 , 2 , 3 , 4 ; however, potential roles for lncRNAs in somatic tissue …
functionally characterized 1 , 2 , 3 , 4 ; however, potential roles for lncRNAs in somatic tissue …
Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex
H Kwon, AN Imbalzano, PA Khavari, RE Kingston… - Nature, 1994 - nature.com
CHROMATIN structure can affect the transcriptional activity of eukaryotic structural genes by
blocking access of sequence-specific activator proteins (activators) to their promoter-binding …
blocking access of sequence-specific activator proteins (activators) to their promoter-binding …
HiChIP: efficient and sensitive analysis of protein-directed genome architecture
Genome conformation is central to gene control but challenging to interrogate. Here we
present HiChIP, a protein-centric chromatin conformation method. HiChIP improves the yield of …
present HiChIP, a protein-centric chromatin conformation method. HiChIP improves the yield of …