[HTML][HTML] Minimum information about an uncultivated virus genome (MIUViG)

…, P Yilmaz, T Yoshida, MJ Young, N Yutin… - Nature …, 2019 - nature.com
We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard
for reporting sequences of uncultivated virus genomes. Minimum Information about an …

Global organization and proposed megataxonomy of the virus world

…, M Krupovic, A Varsani, YI Wolf, N Yutin… - Microbiology and …, 2020 - Am Soc Microbiol
Viruses and mobile genetic elements are molecular parasites or symbionts that coevolve
with nearly all forms of cellular life. The route of virus replication and protein expression is …

Evolution of diverse cell division and vesicle formation systems in Archaea

KS Makarova, N Yutin, SD Bell… - Nature Reviews …, 2010 - nature.com
… VPS4 homologues containing an N-terminal extension. In … We constructed a multiple
alignment of the N-terminal portions … These features, together with the N-terminal localization of …

A genomic update on clostridial phylogeny: G ram‐negative spore formers and other misplaced clostridia

N Yutin, MY Galperin - Environmental microbiology, 2013 - Wiley Online Library
… moved from C lostridia to a separate class N egativicutes. However, draft genome sequences
of the spore‐forming members of the N egativicutes revealed typically clostridial sets of …

Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms

M Boyer, N Yutin, I Pagnier, L Barrassi… - Proceedings of the …, 2009 - National Acad Sciences
Giant viruses such as Mimivirus isolated from amoeba found in aquatic habitats show
biological sophistication comparable to that of simple cellular life forms and seem to evolve by …

[HTML][HTML] Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution

N Yutin, YI Wolf, D Raoult, EV Koonin - Virology journal, 2009 - Springer
… each of them (N 1 and N 2 ) as well as the number of NCVOGs present in both (N U ) were …
was calculated as either s = N U /min(N 1 , N 2 ) or s = N U /sqrt(N 1 × N 2 ) and converted to a …

Abundance of type I toxin–antitoxin systems in bacteria: searches for new candidates and discovery of novel families

…, KS Makarova, SA Shabalina, N Yutin… - Nucleic acids …, 2010 - academic.oup.com
Small, hydrophobic proteins whose synthesis is repressed by small RNAs (sRNAs), denoted
type I toxin–antitoxin modules, were first discovered on plasmids where they regulate …

Giant viruses with an expanded complement of translation system components

F Schulz, N Yutin, NN Ivanova, DR Ortega, TK Lee… - Science, 2017 - science.org
The discovery of giant viruses blurred the sharp division between viruses and cellular life.
Giant virus genomes encode proteins considered as signatures of cellular organisms, …

“Megavirales”, a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses

P Colson, X De Lamballerie, N Yutin, S Asgari… - Archives of …, 2013 - Springer
… Natalya Yutin and Eugene V. Koonin are supported by intramural funds of the US Department
of Health and Human Services (to the National Library of Medicine). James Van Etten is …

Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut

N Yutin, KS Makarova, AB Gussow, M Krupovic… - Nature …, 2018 - nature.com
Metagenomic sequence analysis is rapidly becoming the primary source of virus discovery
1 , 2 – 3 . A substantial majority of the currently available virus genomes come from …