Quantitative trait locus mapping in an F2 Duroc × Pietrain resource population: II. Carcass and meat quality traits

DB Edwards, CW Ernst, NE Raney… - Journal of Animal …, 2008 - academic.oup.com
Pigs from the F 2 generation of a Duroc × Pietrain resource population were evaluated to
discover QTL affecting carcass composition and meat quality traits. Carcass composition …

[HTML][HTML] Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations

…, RJC Cantet, RO Bates, CW Ernst, NE Raney… - BMC …, 2014 - Springer
Background Currently, association studies are analysed using statistical mixed models, with
marker effects estimated by a linear transformation of genomic breeding values. The …

Quantitative trait loci mapping in an F2 Duroc × Pietrain resource population: I. Growth traits

…, RJ Tempelman, GJM Rosa, NE Raney… - Journal of animal …, 2008 - academic.oup.com
Pigs from the F 2 generation of a Duroc × Pietrain resource population were evaluated to
discover QTL affecting growth and composition traits. Body weight and ultrasound estimates of …

[HTML][HTML] Pharmacological zinc and phytase supplementation enhance metallothionein mRNA abundance and protein concentration in newly weaned pigs

MM Martínez, GM Hill, JE Link, NE Raney… - The Journal of …, 2004 - Elsevier
The swine industry feeds pharmacological zinc (Zn) to newly weaned pigs to improve health.
Because most swine diets are plant-based with a high phytic acid content, we hypothesized …

[HTML][HTML] Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels

JL Gualdrón Duarte, RO Bates, CW Ernst, NE Raney… - BMC genetics, 2013 - Springer
Background F 2 resource populations have been used extensively to map QTL segregating
between pig breeds. A limitation associated with the use of these resource populations for …

[HTML][HTML] Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs

…, VD Rilington, A Ragavendran, NE Raney… - PloS one, 2011 - journals.plos.org
Background Nearly 6,000 QTL have been reported for 588 different traits in pigs, more than
in any other livestock species. However, this effort has translated into only a few confirmed …

Genome-wide association study in an F2 Duroc x Pietrain resource population for economically important meat quality and carcass traits

…, D Velez-Irizarry, CW Ernst, NE Raney… - Journal of Animal …, 2017 - academic.oup.com
Meat quality is essential for consumer acceptance, it ultimately impacts pork production
profitability and it is subject to genetic control. The objective of this study was to map genomic …

[HTML][HTML] Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs

…, S Casiro, KR Daza, RO Bates, NE Raney… - BMC genomics, 2019 - Springer
Background Economically important growth and meat quality traits in pigs are controlled by
cascading molecular events occurring during development and continuing throughout the …

[HTML][HTML] Evidence for transcriptome-wide RNA editing among Sus scrofa PRE-1 SINE elements

SA Funkhouser, JP Steibel, RO Bates, NE Raney… - BMC genomics, 2017 - Springer
Background RNA editing by ADAR (adenosine deaminase acting on RNA) proteins is a form
of transcriptional regulation that is widespread among humans and other primates. Based …

[HTML][HTML] Weaning induces stress-dependent DNA methylation and transcriptional changes in piglet PBMCs

…, AM Luttman, KE Wurtz, JM Siegford, NE Raney… - Frontiers in …, 2021 - frontiersin.org
Changes to the epigenome, including those to DNA methylation, have been proposed as
mechanisms by which stress can induce long-term physiological changes in livestock species. …