[PDF][PDF] Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses
…, UJ Phukan, VM González, M Bernardo-Faura, M Valls… - Molecular Plant, 2022 - cell.com
Recognition of a pathogen by the plant immune system often triggers a form of regulated
cell death traditionally known as the hypersensitive response (HR). This type of cell death …
cell death traditionally known as the hypersensitive response (HR). This type of cell death …
MAPK pathway and B cells overactivation in multiple sclerosis revealed by phosphoproteomics and genomic analysis
…, V Pliaka, M Bernardo-Faura, M Rinas… - Proceedings of the …, 2019 - National Acad Sciences
Dysregulation of signaling pathways in multiple sclerosis (MS) can be analyzed by
phosphoproteomics in peripheral blood mononuclear cells (PBMCs). We performed in vitro kinetic …
phosphoproteomics in peripheral blood mononuclear cells (PBMCs). We performed in vitro kinetic …
[HTML][HTML] Efficient randomization of biological networks while preserving functional characterization of individual nodes
Background Networks are popular and powerful tools to describe and model biological
processes. Many computational methods have been developed to infer biological networks from …
processes. Many computational methods have been developed to infer biological networks from …
[HTML][HTML] Multi-parametric analysis and modeling of relationships between mitochondrial morphology and apoptosis
Y Reis, M Bernardo-Faura, D Richter, T Wolf, B Brors… - PLoS …, 2012 - journals.plos.org
… Contributed equally to this work with: Marti Bernardo-Faura, … Contributed equally to this work
with: Marti Bernardo-Faura, … related to either Bax or ΔΨ m . Instead, FL modeling proposes a …
with: Marti Bernardo-Faura, … related to either Bax or ΔΨ m . Instead, FL modeling proposes a …
Phosphoproteomic analyses reveal novel cross‐modulation mechanisms between two signaling pathways in yeast
S Vaga, M Bernardo‐Faura, T Cokelaer… - Molecular systems …, 2014 - embopress.org
Cells respond to environmental stimuli via specialized signaling pathways. Concurrent
stimuli trigger multiple pathways that integrate information, predominantly via protein …
stimuli trigger multiple pathways that integrate information, predominantly via protein …
Signaling networks in MS: a systems-based approach to developing new pharmacological therapies
E Kotelnikova, M Bernardo-Faura… - Multiple Sclerosis …, 2015 - journals.sagepub.com
The pathogenesis of multiple sclerosis (MS) involves alterations to multiple pathways and
processes, which represent a significant challenge for developing more-effective therapies. …
processes, which represent a significant challenge for developing more-effective therapies. …
[HTML][HTML] An artificial miRNA system reveals that relative contribution of translational inhibition to miRNA-mediated regulation depends on environmental and …
P Von Born, M Bernardo-Faura, I Rubio-Somoza - PLoS One, 2018 - journals.plos.org
Development and fitness of any organism rely on properly controlled gene expression. This
is especially true for plants, as their development is determined by both internal and external …
is especially true for plants, as their development is determined by both internal and external …
[HTML][HTML] Protease activities triggered by Ralstonia solanacearum infection in susceptible and tolerant tomato lines
M Planas-Marques, M Bernardo-Faura, J Paulus… - Molecular & Cellular …, 2018 - ASBMB
Activity-based protein profiling (ABPP) is a powerful proteomic technique to display protein
activities in a proteome. It is based on the use of small molecular probes that react with the …
activities in a proteome. It is based on the use of small molecular probes that react with the …
[HTML][HTML] Data-derived modeling characterizes plasticity of MAPK signaling in melanoma
M Bernardo-Faura, S Massen, CS Falk… - PLoS computational …, 2014 - journals.plos.org
The majority of melanomas have been shown to harbor somatic mutations in the RAS-RAF-MEK-MAPK
and PI3K-AKT pathways, which play a major role in regulation of proliferation …
and PI3K-AKT pathways, which play a major role in regulation of proliferation …
[HTML][HTML] Prediction of combination therapies based on topological modeling of the immune signaling network in multiple sclerosis
M Bernardo-Faura, M Rinas, J Wirbel, I Pertsovskaya… - Genome Medicine, 2021 - Springer
Background Multiple sclerosis (MS) is a major health problem, leading to a significant disability
and patient suffering. Although chronic activation of the immune system is a hallmark of …
and patient suffering. Although chronic activation of the immune system is a hallmark of …