User profiles for M. Belmadani

Manuel Belmadani

Bioinformatician, University of British Columbia
Verified email at ubc.ca
Cited by 419

A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on …

…, S Ghosh, M Belmadani, W Keller, M Zavolan - Genome …, 2016 - genome.cshlp.org
Alternative polyadenylation (APA) is a general mechanism of transcript diversification in
mammals, which has been recently linked to proliferative states and cancer. Different 3′ …

VariCarta: A comprehensive database of harmonized genomic variants found in autism spectrum disorder sequencing studies

M Belmadani, M Jacobson, N Holmes, M Phan… - Autism …, 2019 - Wiley Online Library
Recent years have seen a boom in the application of the next‐generation sequencing technology
to the study of human disorders, including Autism Spectrum Disorder (ASD), where the …

[HTML][HTML] Multi-model functionalization of disease-associated PTEN missense mutations identifies multiple molecular mechanisms underlying protein dysfunction

KL Post, M Belmadani, P Ganguly, F Meili… - Nature …, 2020 - nature.com
Functional variomics provides the foundation for personalized medicine by linking genetic
variation to disease expression, outcome and treatment, yet its utility is dependent on …

Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation

TA McDiarmid, M Belmadani, J Liang… - Proceedings of the …, 2020 - National Acad Sciences
A major challenge facing the genetics of autism spectrum disorders (ASDs) is the large and
growing number of candidate risk genes and gene variants of unknown functional …

[HTML][HTML] Assessing transcriptome quality in patch-seq datasets

…, C Bomkamp, BO Mancarci, M Belmadani… - Frontiers in Molecular …, 2018 - frontiersin.org
Patch-seq, combining patch-clamp electrophysiology with single-cell RNA-sequencing (scRNAseq),
enables unprecedented access to a neuron's transcriptomic, electrophysiological, …

Curation of over 10 000 transcriptomic studies to enable data reuse

N Lim, S Tesar, M Belmadani, G Poirier-Morency… - Database, 2021 - academic.oup.com
Vast amounts of transcriptomic data reside in public repositories, but effective reuse remains
challenging. Issues include unstructured dataset metadata, inconsistent data processing …

Whole genome sequencing and variant discovery in the ASPIRE autism spectrum disorder cohort

…, Y Qiao, R Baldwin, M Jacobson, M Belmadani… - Clinical …, 2019 - Wiley Online Library
Autism spectrum disorder (ASD) is a highly heterogeneous genetic disorder with strong
evidence of ASD‐association currently available only for a small number of genes. This makes it …

Big Five and Virtual Reality Marketing Adoption in Morocco: A Deep Learning Approach

…, EM Bourhim, MO Belmadani - 2023 14th International …, 2023 - ieeexplore.ieee.org
With the recent expansion of Head-mounted virtual reality (VR) screens for consumers, many
sectors of industry have begun to recognize the high potential of VR. However, there has …

Interactive exploration, analysis, and visualization of complex phenome–genome datasets with ASPIREdb

…, M Jacobson, M Belmadani… - Human …, 2016 - Wiley Online Library
Identifying variants causal for complex genetic disorders is challenging. With the advent of
whole‐exome and whole‐genome sequencing, computational tools are needed to explore …

Cataloging the potential functional diversity of Cacna1e splice variants using long-read sequencing

S Bhuiyan, JR Tyson, M Belmadani, J Sicherman… - bioRxiv, 2022 - biorxiv.org
Voltage gated calcium channels (VGCCs) regulate the influx of calcium ions in many cell
types, but our lack of knowledge about the plethora of VGCC splice variants remains a gap in …