We present a fast and flexible software package—SimPhy—for the simulation of multiple gene
families evolving under incomplete lineage sorting, gene duplication and loss, horizontal …

We identify amino acid variants within dominant SARS-CoV-2 T cell epitopes by interrogating
global sequence data. Several variants within nucleocapsid and ORF3a epitopes have …

… Leonardo de Oliveira Martins et al. / Electronic Letters on Computer Vision and Image
Analysis 8(2):39-50, 2009 … Leonardo de Oliveira Martins et al. / Electronic Letters on …

… Leonardo de Oliveira Martins Leonardo de Oliveira Martins … (D) Western blot shows
downregulation of vinculin protein expression on nN (HUVEC: N = 2, hMSC: N = 3, mean ± SD). (E) …

We present CoronaHiT, a platform and throughput flexible method for sequencing SARS-CoV-2
genomes (≤ 96 on MinION or > 96 on Illumina NextSeq) depending on changing …

The SARS-CoV-2 pandemic has been characterised by the regular emergence of genomic
variants. With natural and vaccine-induced population immunity at high levels, evolutionary …

The COVID-19 pandemic has spread rapidly throughout the world. In the UK, the initial peak
was in April 2020; in the county of Norfolk (UK) and surrounding areas, which has a stable, …

… Author links open overlay panel António Carlos Pinheiro Fernandes a , Lisa Maria de
Oliveira Martins a , Fernando António Leal Pacheco b , Luís Filipe Sanches Fernandes a …

Background Since the emergence of SARS-CoV-2, evolutionary pressure has driven large
increases in the transmissibility of the virus. However, with increasing levels of immunity …

Background Advances in SARS-CoV-2 sequencing have enabled identification of new
variants, tracking of its evolution, and monitoring of its spread. We aimed to use whole genome …