User profiles for K. Pollard

Katherine S Pollard

- Verified email at gladstone.ucsf.edu - Cited by 46540

Kenneth Michael Pollard

- Verified email at scripps.edu - Cited by 6153

Navigating the pitfalls of applying machine learning in genomics

…, J Schreiber, WS Noble, KS Pollard - Nature Reviews Genetics, 2022 - nature.com
The scale of genetic, epigenomic, transcriptomic, cheminformatic and proteomic data
available today, coupled with easy-to-use machine learning (ML) toolkits, has propelled the …

[HTML][HTML] Silica, silicosis, and autoimmunity

KM Pollard - Frontiers in immunology, 2016 - frontiersin.org
Inhalation of dust containing crystalline silica is associated with a number of acute and
chronic diseases including systemic autoimmune diseases. Evidence for the link with …

[HTML][HTML] Interferon-γ and systemic autoimmunity

KM Pollard, DM Cauvi, CB Toomey, KV Morris… - Discovery …, 2013 - ncbi.nlm.nih.gov
The term interferon describes a family of proteins consisting of three major types (I, II, III)
which differ in their primary protein sequences, cognate receptors, genetic loci, and cell types …

Detection of nonneutral substitution rates on mammalian phylogenies

KS Pollard, MJ Hubisz, KR Rosenbloom… - Genome …, 2010 - genome.cshlp.org
Methods for detecting nucleotide substitution rates that are faster or slower than expected
under neutral drift are widely used to identify candidate functional elements in genomic …

[HTML][HTML] A communal catalogue reveals Earth's multiscale microbial diversity

…, A Clauset, RL Stevens, A Shade, KS Pollard… - Nature, 2017 - nature.com
Our growing awareness of the microbial world’s importance and diversity contrasts starkly
with our limited understanding of its fundamental structure. Despite recent advances in DNA …

Discovery of a cool planet of 5.5 Earth masses through gravitational microlensing

…, K Pollard, K Sahu, C Vinter, J Wambsganss, K Woller… - Nature, 2006 - nature.com
In the favoured core-accretion model of formation of planetary systems, solid planetesimals
accumulate to build up planetary cores, which then accrete nebular gas if they are sufficiently …

[HTML][HTML] A high-resolution map of human evolutionary constraint using 29 mammals

…, D Haussler, A Siepel, N Goldman, KS Pollard… - Nature, 2011 - nature.com
The comparison of related genomes has emerged as a powerful lens for genome interpretation.
Here we report the sequencing and comparative analysis of 29 eutherian genomes. We …

[PDF][PDF] Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy

…, B Joehnk, K Walcott, A Sil, C Langelier, KS Pollard… - Cell, 2021 - cell.com
The December 2019 outbreak of a novel respiratory virus, SARS-CoV-2, has become an
ongoing global pandemic due in part to the challenge of identifying symptomatic, asymptomatic, …

[HTML][HTML] A unified catalog of 204,938 reference genomes from the human gut microbiome

…, F Strozzi, M Beracochea, ZJ Shi, KS Pollard… - Nature …, 2021 - nature.com
Comprehensive, high-quality reference genomes are required for functional characterization
and taxonomic assignment of the human gut microbiota. We present the Unified Human …

An RNA gene expressed during cortical development evolved rapidly in humans

KS Pollard, SR Salama, N Lambert, MA Lambot… - Nature, 2006 - nature.com
The developmental and evolutionary mechanisms behind the emergence of human-specific
brain features remain largely unknown. However, the recent ability to compare our genome …