User profiles for K. Blin
Kai BlinSenior Researcher at the Novo Nordisk Foundation Center for Biosustainability Verified email at biosustain.dtu.dk Cited by 15940 |
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
K Blin, S Shaw, K Steinke, R Villebro… - Nucleic acids …, 2019 - academic.oup.com
Secondary metabolites produced by bacteria and fungi are an important source of
antimicrobials and other bioactive compounds. In recent years, genome mining has seen broad …
antimicrobials and other bioactive compounds. In recent years, genome mining has seen broad …
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters
Many drugs are derived from small molecules produced by microorganisms and plants, so-called
natural products. Natural products have diverse chemical structures, but the …
natural products. Natural products have diverse chemical structures, but the …
antiSMASH 6.0: improving cluster detection and comparison capabilities
K Blin, S Shaw, AM Kloosterman… - Nucleic acids …, 2021 - academic.oup.com
Many microorganisms produce natural products that form the basis of antimicrobials,
antivirals, and other drugs. Genome mining is routinely used to complement screening-based …
antivirals, and other drugs. Genome mining is routinely used to complement screening-based …
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
Microorganisms produce small bioactive compounds as part of their secondary or specialised
metabolism. Often, such metabolites have antimicrobial, anticancer, antifungal, antiviral or …
metabolism. Often, such metabolites have antimicrobial, anticancer, antifungal, antiviral or …
[HTML][HTML] Minimum information about a biosynthetic gene cluster
A wide variety of enzymatic pathways that produce specialized metabolites in bacteria, fungi
and plants are known to be encoded in biosynthetic gene clusters. Information about these …
and plants are known to be encoded in biosynthetic gene clusters. Information about these …
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
Microbial secondary metabolism constitutes a rich source of antibiotics, chemotherapeutics,
insecticides and other high-value chemicals. Genome mining of gene clusters that encode …
insecticides and other high-value chemicals. Genome mining of gene clusters that encode …
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
Bacterial and fungal secondary metabolism is a rich source of novel bioactive compounds
with potential pharmaceutical applications as antibiotics, anti-tumor drugs or cholesterol-…
with potential pharmaceutical applications as antibiotics, anti-tumor drugs or cholesterol-…
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
Many antibiotics, chemotherapeutics, crop protection agents and food preservatives originate
from molecules produced by bacteria, fungi or plants. In recent years, genome mining …
from molecules produced by bacteria, fungi or plants. In recent years, genome mining …
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
With an ever-increasing amount of (meta)genomic data being deposited in sequence databases,
(meta)genome mining for natural product biosynthetic pathways occupies a critical role …
(meta)genome mining for natural product biosynthetic pathways occupies a critical role …
Artificial intelligence for natural product drug discovery
Developments in computational omics technologies have provided new means to access the
hidden diversity of natural products, unearthing new potential for drug discovery. In parallel…
hidden diversity of natural products, unearthing new potential for drug discovery. In parallel…