User profiles for K. S. Rathi
Komal S RathiBioinformatics Scientist III at Children's Hospital of Philadelphia Verified email at email.chop.edu Cited by 1816 |
Hedgehog actively maintains adult lung quiescence and regulates repair and regeneration
Postnatal tissue quiescence is thought to be a default state in the absence of a proliferative
stimulus such as injury. Although previous studies have demonstrated that certain embryonic …
stimulus such as injury. Although previous studies have demonstrated that certain embryonic …
[PDF][PDF] Comprehensive multi-omics analysis reveals mitochondrial stress as a central biological hub for spaceflight impact
Spaceflight is known to impose changes on human physiology with unknown molecular
etiologies. To reveal these causes, we used a multi-omics, systems biology analytical approach …
etiologies. To reveal these causes, we used a multi-omics, systems biology analytical approach …
[PDF][PDF] Genomic profiling of childhood tumor patient-derived xenograft models to enable rational clinical trial design
Accelerating cures for children with cancer remains an immediate challenge as a result of
extensive oncogenic heterogeneity between and within histologies, distinct molecular …
extensive oncogenic heterogeneity between and within histologies, distinct molecular …
Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development
Long noncoding RNAs (lncRNAs) are thought to play important roles in regulating gene
transcription, but few have well-defined expression patterns or known biological functions during …
transcription, but few have well-defined expression patterns or known biological functions during …
[PDF][PDF] Identification of GPC2 as an oncoprotein and candidate immunotherapeutic target in high-risk neuroblastoma
…, Z Zhu, M Lane, D Martinez, S Heitzeneder, KS Rathi… - Cancer cell, 2017 - cell.com
We developed an RNA-sequencing-based pipeline to discover differentially expressed cell-surface
molecules in neuroblastoma that meet criteria for optimal immunotherapeutic target …
molecules in neuroblastoma that meet criteria for optimal immunotherapeutic target …
The ADP/ATP translocase drives mitophagy independent of nucleotide exchange
Mitochondrial homeostasis depends on mitophagy, the programmed degradation of
mitochondria. Only a few proteins are known to participate in mitophagy. Here we develop a …
mitochondria. Only a few proteins are known to participate in mitophagy. Here we develop a …
[HTML][HTML] Clinical utility of custom-designed NGS panel testing in pediatric tumors
Background Somatic genetic testing is rapidly becoming the standard of care in many adult
and pediatric cancers. Previously, the standard approach was single-gene or focused …
and pediatric cancers. Previously, the standard approach was single-gene or focused …
[PDF][PDF] Macrophages in SHH subgroup medulloblastoma display dynamic heterogeneity that varies with treatment modality
Tumor-associated macrophages (TAMs) play an important role in tumor immunity and comprise
of subsets that have distinct phenotype, function, and ontology. Transcriptomic analyses …
of subsets that have distinct phenotype, function, and ontology. Transcriptomic analyses …
YAP1 mediates resistance to MEK1/2 inhibition in neuroblastomas with hyperactivated RAS signaling
High-risk neuroblastomas with hyperactivated RAS signaling escape the selective pressure
of MEK inhibition via YAP1-mediated transcriptional reprogramming and may be sensitive to …
of MEK inhibition via YAP1-mediated transcriptional reprogramming and may be sensitive to …
Targeting PARP-1 with alpha-particles is potently cytotoxic to human neuroblastoma in preclinical models
Alpha-emitters can be pharmacologically delivered for irradiation of single cancer cells, but
cellular lethality could be further enhanced by targeting alpha-emitters directly to the nucleus. …
cellular lethality could be further enhanced by targeting alpha-emitters directly to the nucleus. …