User profiles for J. Romiguier
Jonathan RomiguierInstitut des Sciences de l'Evolution de Montpellier Verified email at unil.ch Cited by 3629 |
MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics
…, A Schomaker‐Bastos, J Romiguier… - Molecular ecology …, 2020 - Wiley Online Library
Thanks to the development of high‐throughput sequencing technologies, target enrichment
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
Comparative population genomics in animals uncovers the determinants of genetic diversity
J Romiguier, P Gayral, M Ballenghien, A Bernard… - Nature, 2014 - nature.com
Genetic diversity is the amount of variation observed between DNA sequences from distinct
individuals of a given species. This pivotal concept of population genetics has implications …
individuals of a given species. This pivotal concept of population genetics has implications …
[HTML][HTML] Shedding light on the grey zone of speciation along a continuum of genomic divergence
Speciation results from the progressive accumulation of mutations that decrease the
probability of mating between parental populations or reduce the fitness of hybrids—the so-called …
probability of mating between parental populations or reduce the fitness of hybrids—the so-called …
Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes
… Branch lengths quantify the amount of GC3 divergence: the branch connecting nodes i and
j has a length proportional to D i,j (Equation 2). The estimated ancestral GC content of the …
j has a length proportional to D i,j (Equation 2). The estimated ancestral GC content of the …
Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals
Despite the rapid increase of size in phylogenomic data sets, a number of important nodes
on animal phylogeny are still unresolved. Among these, the rooting of the placental mammal …
on animal phylogeny are still unresolved. Among these, the rooting of the placental mammal …
Codon usage bias in animals: disentangling the effects of natural selection, effective population size, and GC-biased gene conversion
Selection on codon usage bias is well documented in a number of microorganisms. Whether
codon usage is also generally shaped by natural selection in large organisms, despite their …
codon usage is also generally shaped by natural selection in large organisms, despite their …
Phylogenomics controlling for base compositional bias reveals a single origin of eusociality in corbiculate bees
As increasingly large molecular data sets are collected for phylogenomics, the conflicting
phylogenetic signal among gene trees poses challenges to resolve some difficult nodes of the …
phylogenetic signal among gene trees poses challenges to resolve some difficult nodes of the …
Extensive recent secondary contacts between four European white oak species
Historical trajectories of tree species during the late Quaternary have been well reconstructed
through genetic and palaeobotanical studies. However, many congeneric tree species are …
through genetic and palaeobotanical studies. However, many congeneric tree species are …
[HTML][HTML] Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition
… In agreement with this idea, Romiguier et al. [21] observed that mammalian lineages show
negative correlations between both body mass, expected to be negatively associated with N e …
negative correlations between both body mass, expected to be negatively associated with N e …
Population genomics of eusocial insects: the costs of a vertebrate‐like effective population size
J Romiguier, J Lourenco, P Gayral… - Journal of …, 2014 - academic.oup.com
The evolution of reproductive division of labour and social life in social insects has lead to
the emergence of several life‐history traits and adaptations typical of larger organisms: social …
the emergence of several life‐history traits and adaptations typical of larger organisms: social …