Current research in biology uses evermore complex computational and imaging tools. Here
we describe Icy, a collaborative bioimage informatics platform that combines a community …

Particle tracking is of key importance for quantitative analysis of intracellular dynamic
processes from time-lapse microscopy image data. Because manually detecting and following …

… Zhang (bzhang@pasteur.fr) and J.-C. Olivo-Marin (jcolivo@pasteur.fr) are with the Unité d'Analyse
d'Images Quantitative, Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris …

In variant Creutzfeldt–Jakob disease, prions (PrP Sc ) enter the body with contaminated
foodstuffs and can spread from the intestinal entry site to the central nervous system (CNS) by …

… J , with a filter augmented at each scale i by inserting 2 i−1 −1 zeroes between two taps. At
the final level J, we are thus given a set of J+1 images, W=W 1 ,…,W J , A J … y) 0<i⩽J, while the …

We present a combined report on the results of three editions of the Cell Tracking Challenge,
an ongoing initiative aimed at promoting the development and objective evaluation of cell …

Confocal laser scanning microscopy is a powerful and popular technique for 3D imaging of
biological specimens. Although confocal microscopy images are much sharper than …

Abstract Changes in the transcriptional state of genes have been correlated with their
repositioning within the nuclear space 1 . Tethering reporter genes to the nuclear envelope alone …

… Gerlich and J. Ellenberg, “4D imaging to assay complex dynamics in live specimens,” Nat. …
Guillén, and J.-C. Olivo-Marin, “Segmentation and tracking of migrating cells in …

… Meas-Yedid and J.-C. Olivo-Marin, “Active contours for the movement and motility analysis of
biological objects,” … Olivo-Marin, “Active contours applied to the shape and motion analysis …