User profiles for J. Kebschull
Justus KebschullJohns Hopkins University Verified email at kebschull.me Cited by 2034 |
Cellular barcoding: lineage tracing, screening and beyond
JM Kebschull, AM Zador - Nature methods, 2018 - nature.com
Cellular barcoding is a technique in which individual cells are labeled with unique nucleic
acid sequences, termed barcodes, so that they can be tracked through space and time. …
acid sequences, termed barcodes, so that they can be tracked through space and time. …
[HTML][HTML] Cerebellum lecture: the cerebellar nuclei—core of the cerebellum
JM Kebschull, F Casoni, GG Consalez, D Goldowitz… - The Cerebellum, 2024 - Springer
The cerebellum is a key player in many brain functions and a major topic of neuroscience
research. However, the cerebellar nuclei (CN), the main output structures of the cerebellum, …
research. However, the cerebellar nuclei (CN), the main output structures of the cerebellum, …
Hyperexcitable arousal circuits drive sleep instability during aging
Sleep quality declines with age; however, the underlying mechanisms remain elusive. We
found that hyperexcitable hypocretin/orexin (Hcrt/OX) neurons drive sleep fragmentation …
found that hyperexcitable hypocretin/orexin (Hcrt/OX) neurons drive sleep fragmentation …
[PDF][PDF] High-throughput mapping of single-neuron projections by sequencing of barcoded RNA
JM Kebschull, PG da Silva, AP Reid, ID Peikon… - Neuron, 2016 - cell.com
Neurons transmit information to distant brain regions via long-range axonal projections. In
the mouse, area-to-area connections have only been systematically mapped using bulk …
the mouse, area-to-area connections have only been systematically mapped using bulk …
Sources of PCR-induced distortions in high-throughput sequencing data sets
JM Kebschull, AM Zador - Nucleic acids research, 2015 - academic.oup.com
… N j of molecules at cycle j. Assuming that the probability of template switching following a
collision is s 0 and s 0 ≪ 1/N j , then the total number S j of template switches on cycle j is …
collision is s 0 and s 0 ≪ 1/N j , then the total number S j of template switches on cycle j is …
The logic of single-cell projections from visual cortex
… i,j representing the absolute counts of barcode i in area j as previously described 30 . We
de-multiplexed the sequencing results, extracted the absolute counts of each barcode in each …
de-multiplexed the sequencing results, extracted the absolute counts of each barcode in each …
Cerebellar nuclei evolved by repeatedly duplicating a conserved cell-type set
INTRODUCTION The brains of extant animals have evolved over hundreds of millions of
years from simple circuits. Cell types diversified, connections elaborated, and new brain …
years from simple circuits. Cell types diversified, connections elaborated, and new brain …
[PDF][PDF] High-throughput mapping of long-range neuronal projection using in situ sequencing
Understanding neural circuits requires deciphering interactions among myriad cell types
defined by spatial organization, connectivity, gene expression, and other properties. Resolving …
defined by spatial organization, connectivity, gene expression, and other properties. Resolving …
High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex
In most sensory modalities, neuronal connectivity reflects behaviorally relevant stimulus
features, such as spatial location, orientation, and sound frequency. By contrast, the prevailing …
features, such as spatial location, orientation, and sound frequency. By contrast, the prevailing …
Toward community-driven big open brain science: open big data and tools for structure, function, and genetics
As acquiring bigger data becomes easier in experimental brain science, computational and
statistical brain science must achieve similar advances to fully capitalize on these data. …
statistical brain science must achieve similar advances to fully capitalize on these data. …