The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans

…, M Sammeth, M Mele, F Reverter, JM Goldmann… - Science, 2015 - science.org
Understanding the functional consequences of genetic variation, and how it affects complex
human disease and quantitative traits, remains a critical challenge for biomedicine. We …

The human transcriptome across tissues and individuals

…, J Monlong, M Sammeth, TR Young, JM Goldmann… - Science, 2015 - science.org
Transcriptional regulation and posttranscriptional processing underlie many cellular and
organismal phenotypes. We used RNA sequence data generated by Genotype-Tissue …

Activation of proto-oncogenes by disruption of chromosome neighborhoods

…, J Goldmann, BR Lajoie, ZP Fan, AA Sigova, J Reddy… - Science, 2016 - science.org
Oncogenes are activated through well-known chromosomal alterations such as gene fusion,
translocation, and focal amplification. In light of recent evidence that the control of key …

[HTML][HTML] De novo mutations reflect development and aging of the human germline

JM Goldmann, JA Veltman, C Gilissen - Trends in Genetics, 2019 - cell.com
Human germline de novo mutations (DNMs) are both a driver of evolution and an important
cause of genetic diseases. In the past few years, whole-genome sequencing (WGS) of parent…

Parkinson-associated risk variant in distal enhancer of α-synuclein modulates target gene expression

…, BJ Abraham, JC Latourelle, MI Barrasa, J Goldmann… - Nature, 2016 - nature.com
Genome-wide association studies (GWAS) have identified numerous genetic variants
associated with complex diseases, but mechanistic insights are impeded by a lack of …

A bioinformatic assay for pluripotency in human cells

…, G Altun, EP Papapetrou, S Danner, JE Goldmann… - Nature …, 2011 - nature.com
Pluripotent stem cells (PSCs) are defined by their potential to generate all cell types of an
organism. The standard assay for pluripotency of mouse PSCs is cell transmission through the …

Effect of predicted protein-truncating genetic variants on the human transcriptome

…, A Battle, S Mostafavi, M Mele, F Reverter, J Goldmann… - Science, 2015 - science.org
Accurate prediction of the functional effect of genetic variation is critical for clinical genome
interpretation. We systematically characterized the transcriptome effects of protein-truncating …

Parent-of-origin-specific signatures of de novo mutations

JM Goldmann, WSW Wong, M Pinelli, T Farrah… - Nature …, 2016 - nature.com
De novo mutations (DNMs) originating in gametogenesis are an important source of genetic
variation. We use a data set of 7,216 autosomal DNMs with resolved parent of origin from …

Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas

…, K Mishra-Gorur, D Durán, JE Goldmann, J Schramm… - Nature …, 2016 - nature.com
RNA polymerase II mediates the transcription of all protein-coding genes in eukaryotic cells,
a process that is fundamental to life. Genomic mutations altering this enzyme have not …

T cells traffic from brain to cervical lymph nodes via the cribroid plate and the nasal mucosa

J Goldmann, E Kwidzinski, C Brandt… - Journal of leukocyte …, 2006 - academic.oup.com
Although drainage pathways of soluble antigens from brain to cervical lymph nodes have
been well established, there is no direct evidence for similar routes of leukocytes leaving the …