User profiles for J. Bolleman
Jerven BollemanSwiss Institute of Bioinformatics Verified email at sib.swiss Cited by 28491 |
Genetic variations and diseases in UniProtKB/Swiss‐Prot: The ins and outs of expert manual curation
ML Famiglietti, A Estreicher, A Gos, J Bolleman… - Human …, 2014 - Wiley Online Library
During the last few years, next‐generation sequencing (NGS) technologies have
accelerated the detection of genetic variants resulting in the rapid discovery of new disease‐associated …
accelerated the detection of genetic variants resulting in the rapid discovery of new disease‐associated …
The EBI RDF platform: linked open data for the life sciences
Motivation: Resource description framework (RDF) is an emerging technology for describing,
publishing and linking life science data. As a major provider of bioinformatics data and …
publishing and linking life science data. As a major provider of bioinformatics data and …
Activities at the universal protein resource (UniProt)
…, MC Blatter, B Boeckmann, J Bolleman… - Nucleic acids …, 2014 - avesis.hacettepe.edu.tr
The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to provide
the scientific community with a comprehensive, high-quality and freely accessible resource …
the scientific community with a comprehensive, high-quality and freely accessible resource …
[HTML][HTML] BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
The application of semantic technologies to the integration of biological data and the
interoperability of bioinformatics analysis and visualization tools has been the common theme of a …
interoperability of bioinformatics analysis and visualization tools has been the common theme of a …
[HTML][HTML] Interoperability and FAIRness through a novel combination of Web technologies
…, M Thompson, R Kaliyaperumal, JT Bolleman… - PeerJ Computer …, 2017 - peerj.com
Licence This is an open access article distributed under the terms of the Creative Commons
Attribution License, which permits unrestricted use, distribution, reproduction and adaptation …
Attribution License, which permits unrestricted use, distribution, reproduction and adaptation …
Enzyme annotation in UniProtKB using Rhea
…, TB Neto, S Gehant, P Bansal, J Bolleman… - …, 2020 - academic.oup.com
Motivation To provide high quality computationally tractable enzyme annotation in UniProtKB
using Rhea, a comprehensive expert-curated knowledgebase of biochemical reactions …
using Rhea, a comprehensive expert-curated knowledgebase of biochemical reactions …
[HTML][HTML] The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies
Background BioHackathon 2010 was the third in a series of meetings hosted by the Database
Center for Life Sciences (DBCLS) in Tokyo, Japan. The overall goal of the BioHackathon …
Center for Life Sciences (DBCLS) in Tokyo, Japan. The overall goal of the BioHackathon …
UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase
…, AH Auchincloss, D Baratin, J Bolleman… - …, 2020 - academic.oup.com
Motivation The number of protein records in the UniProt Knowledgebase (UniProtKB: https://www.uniprot.org
) continues to grow rapidly as a result of genome sequencing and the …
) continues to grow rapidly as a result of genome sequencing and the …
[HTML][HTML] Property graph vs RDF triple store: A comparison on glycan substructure search
Resource description framework (RDF) and Property Graph databases are emerging
technologies that are used for storing graph-structured data. We compare these technologies …
technologies that are used for storing graph-structured data. We compare these technologies …
[HTML][HTML] Introducing glycomics data into the Semantic Web
KF Aoki-Kinoshita, J Bolleman, MP Campbell… - Journal of Biomedical …, 2013 - Springer
Background Glycoscience is a research field focusing on complex carbohydrates (otherwise
known as glycans) a , which can, for example, serve as “switches” that toggle between …
known as glycans) a , which can, for example, serve as “switches” that toggle between …