[HTML][HTML] Diagnosis and management of lentigo maligna: a review

JM Kasprzak, YG Xu - Drugs in context, 2015 - ncbi.nlm.nih.gov
Lentigo maligna is a melanocytic neoplasm occurring on sun-exposed skin, usually on the
head and neck, of middle-aged and elderly patients. It is thought to represent the in situ phase …

MODOMICS: a database of RNA modification pathways. 2008 update

…, KH Kaminska, JM Kasprzak, JM Bujnicki… - Nucleic acids …, 2009 - academic.oup.com
MODOMICS, a database devoted to the systems biology of RNA modification, has been
subjected to substantial improvements. It provides comprehensive information on the chemical …

A bax-induced pro-oxidant state is critical for cytochromec release during programmed neuronal death

RA Kirkland, JA Windelborn, JM Kasprzak… - Journal of …, 2002 - Soc Neuroscience
Bax is required for the apoptotic death of sympathetic neurons deprived of nerve growth factor
(NGF). After NGF withdrawal, Bax translocates from the cytoplasm to the mitochondria of …

Enhanced metastatic risk assessment in cutaneous squamous cell carcinoma with the 40-gene expression profile test

SF Ibrahim, JM Kasprzak, MA Hall, AL Fitzgerald… - Future …, 2022 - Future Medicine
Aim: To clinically validate the 40-gene expression profile (40-GEP) test for cutaneous squamous
cell carcinoma patients and evaluate coupling the test with individual clinicopathologic …

[PDF][PDF] Virtual screening strategies in drug design–methods and applications

…, JM Kasprzak, KH Kaminska, JM Bujnicki - …, 2011 - journals.pan.pl
Virtual screening (VS) overcomes the limitations of traditional high-throughput screening (HTS)
by applying computer-based methods in drug discovery. VS takes advantage of fast …

[HTML][HTML] The architecture of the Schizosaccharomyces pombe CCR4-NOT complex

M Ukleja, J Cuellar, A Siwaszek, JM Kasprzak… - Nature …, 2016 - nature.com
CCR4-NOT is a large protein complex present both in cytoplasm and the nucleus of eukaryotic
cells. Although it is involved in a variety of distinct processes related to expression of …

YbeA is the m3Ψ methyltransferase RlmH that targets nucleotide 1915 in 23S rRNA

E Purta, KH Kaminska, JM Kasprzak, JM Bujnicki… - Rna, 2008 - rnajournal.cshlp.org
Pseudouridines in the stable RNAs of Bacteria are seldom subjected to further modification.
There are 11 pseudouridine (Ψ) sites in Escherichia coli rRNA, and further modification is …

Computational modeling of protein–RNA complex structures

…, D Matelska, M Magnus, G Chojnowski, JM Kasprzak… - Methods, 2014 - Elsevier
Protein–RNA interactions play fundamental roles in many biological processes, such as
regulation of gene expression, RNA splicing, and protein synthesis. The understanding of these …

Structural and functional insights into tRNA binding and adenosine N1-methylation by an archaeal Trm10 homologue

…, M Roovers, L Wauters, JM Kasprzak… - Nucleic acids …, 2016 - academic.oup.com
Purine nucleosides on position 9 of eukaryal and archaeal tRNAs are frequently modified in
vivo by the post-transcriptional addition of a methyl group on their N1 atom. The …

[HTML][HTML] Molecular evolution of dihydrouridine synthases

JM Kasprzak, A Czerwoniec, JM Bujnicki - BMC bioinformatics, 2012 - Springer
Background Dihydrouridine (D) is a modified base found in conserved positions in the D-loop
of tRNA in Bacteria, Eukaryota, and some Archaea. Despite the abundant occurrence of D, …