Predicting the consequences of manipulating genotype (G) and agronomic management (M)
on agricultural ecosystem performances under future environmental (E) conditions remains …

Unlike in mammals, plants rapidly delete functionless, nonrepetitive DNA from their
genomes. Following paleopolyploidies, duplicate genes are deleted by intrachromosomal …

Climate change during the last 40 years has had a serious impact on agriculture and threatens
global food and nutritional security. From over half a million plant species, cereals and …

Ancient tetraploidies are found throughout the eukaryotes. After duplication, one copy of
each duplicate gene pair tends to be lost (fractionate). For all studied tetraploidies, the loss of …

A complete telomere-to-telomere (T2T) finished genome has been the long pursuit of genomic
research. Through generating deep coverage ultralong Oxford Nanopore Technology (…

Coexpression networks and gene regulatory networks (GRNs) are emerging as important
tools for predicting functional roles of individual genes at a system-wide scale. To enable …

The ordering and orientation of genomic scaffolds to reconstruct chromosomes is an essential
step during de novo genome assembly. Because this process utilizes various mapping …

Previous work in Arabidopsis showed that after an ancient tetraploidy event, genes were
preferentially removed from one of the two homeologs, a process known as fractionation. The …

Automated collection of large scale plant phenotype datasets using high throughput imaging
systems has the potential to alleviate current bottlenecks in data-driven plant breeding and …

Image-based high-throughput plant phenotyping in greenhouse has the potential to relieve
the bottleneck currently presented by phenotypic scoring which limits the throughput of gene …