User profiles for J. A. Kaczmarski
Joe A KaczmarskiLecturer, Australian National University Verified email at anu.edu.au Cited by 604 |
Ancestral sequence reconstruction for protein engineers
MA Spence, JA Kaczmarski, JW Saunders… - Current opinion in …, 2021 - Elsevier
In addition to its value in the study of molecular evolution, ancestral sequence reconstruction
(ASR) has emerged as a useful methodology for engineering proteins with enhanced …
(ASR) has emerged as a useful methodology for engineering proteins with enhanced …
[HTML][HTML] Structures of a non-ribosomal peptide synthetase condensation domain suggest the basis of substrate selectivity
Non-ribosomal peptide synthetases are important enzymes for the assembly of complex
peptide natural products. Within these multi-modular assembly lines, condensation domains …
peptide natural products. Within these multi-modular assembly lines, condensation domains …
Ancestral Sequence Reconstruction Identifies Structural Changes Underlying the Evolution of Ideonella sakaiensis PETase and Variants with Improved Stability and …
…, J Ton, C Gomez, LL Tan, JA Kaczmarski… - Biochemistry, 2022 - ACS Publications
The improved production, recycling, and removal of plastic waste, such as polyethylene
terephthalate (PET), are pressing environmental and economic issues for society. Biocatalytic (…
terephthalate (PET), are pressing environmental and economic issues for society. Biocatalytic (…
Evolution of cyclohexadienyl dehydratase from an ancestral solute-binding protein
The emergence of enzymes through the neofunctionalization of noncatalytic proteins is
ultimately responsible for the extraordinary range of biological catalysts observed in nature. …
ultimately responsible for the extraordinary range of biological catalysts observed in nature. …
[HTML][HTML] Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics
Kistamicin is a divergent member of the glycopeptide antibiotics, a structurally complex
class of important, clinically relevant antibiotics often used as the last resort against resistant …
class of important, clinically relevant antibiotics often used as the last resort against resistant …
[HTML][HTML] Altered conformational sampling along an evolutionary trajectory changes the catalytic activity of an enzyme
JA Kaczmarski, MC Mahawaththa, A Feintuch… - Nature …, 2020 - nature.com
Several enzymes are known to have evolved from non-catalytic proteins such as solute-binding
proteins (SBPs). Although attention has been focused on how a binding site can evolve …
proteins (SBPs). Although attention has been focused on how a binding site can evolve …
Potent cyclic peptide inhibitors of FXIIa discovered by mRNA display with genetic code reprogramming
The contact system comprises a series of serine proteases that mediate procoagulant and
proinflammatory activities via the intrinsic pathway of coagulation and the kallikrein–kinin …
proinflammatory activities via the intrinsic pathway of coagulation and the kallikrein–kinin …
[HTML][HTML] T-dependent B cell responses to Plasmodium induce antibodies that form a high-avidity multivalent complex with the circumsporozoite protein
CR Fisher, HJ Sutton, JA Kaczmarski… - PLoS …, 2017 - journals.plos.org
The repeat region of the Plasmodium falciparum circumsporozoite protein (CSP) is a major
vaccine antigen because it can be targeted by parasite neutralizing antibodies; however, little …
vaccine antigen because it can be targeted by parasite neutralizing antibodies; however, little …
[PDF][PDF] Avid binding by B cells to the Plasmodium circumsporozoite protein repeat suppresses responses to protective subdominant epitopes
Antibodies targeting the NANP/NVDP repeat domain of the Plasmodium falciparum
circumsporozoite protein (CSP Repeat ) can protect against malaria. However, it has also been …
circumsporozoite protein (CSP Repeat ) can protect against malaria. However, it has also been …
Structural Basis for the Allosteric Regulation of the SbtA Bicarbonate Transporter by the PII-like Protein, SbtB, from Cyanobium sp. PCC7001
Cyanobacteria have evolved a suite of enzymes and inorganic carbon (C i ) transporters
that improve photosynthetic performance by increasing the localized concentration of CO 2 …
that improve photosynthetic performance by increasing the localized concentration of CO 2 …