User profiles for G. I. Allen

Genevera I. Allen

Associate Professor, Electrical and Computer Engineering, Statistics, and Computer Science …
Verified email at rice.edu
Cited by 3365

Cerebrocerebellar communication systems.

GI Allen, N Tsukahara - Physiological reviews, 1974 - journals.physiology.org
In view of the extensive development of the cerebellar hemispheres and the cerebral cortex
in mammals, it is natural to inquire whether some highly significant and unique functional …

A review of multivariate distributions for count data derived from the Poisson distribution

DI Inouye, E Yang, GI Allen… - Wiley Interdisciplinary …, 2017 - Wiley Online Library
… Such an estimation method may yield interesting network estimates, but as Allen and Liu72
note, these estimates do not correspond to a consistent joint density. Instead, the underlying …

Interpretable machine learning for discovery: Statistical challenges and opportunities

GI Allen, L Gan, L Zheng - Annual Review of Statistics and Its …, 2023 - annualreviews.org
New technologies have led to vast troves of large and complex data sets across many scientific
domains and industries. People routinely use machine learning techniques not only to …

[PDF][PDF] Graphical models via univariate exponential family distributions

E Yang, P Ravikumar, GI Allen, Z Liu - The Journal of Machine Learning …, 2015 - jmlr.org
Undirected graphical models, or Markov networks, are a popular class of statistical models,
used in a wide variety of applications. Popular instances of this class include Gaussian …

TCGA2STAT: simple TCGA data access for integrated statistical analysis in R

YW Wan, GI Allen, Z Liu - Bioinformatics, 2016 - academic.oup.com
Motivation: Massive amounts of high-throughput genomics data profiled from tumor samples
were made publicly available by the Cancer Genome Atlas (TCGA). Results: We have …

A generalized least-square matrix decomposition

GI Allen, L Grosenick, J Taylor - Journal of the American Statistical …, 2014 - Taylor & Francis
GI Allen is partially supported by NSF DMS-1209017, J. Taylor is partially supported by
NSF DMS-0906801, and L. Grosenick is supported by NSF IGERT Award #0801700. …

[HTML][HTML] Transposable regularized covariance models with an application to missing data imputation

GI Allen, R Tibshirani - The Annals of Applied Statistics, 2010 - ncbi.nlm.nih.gov
Missing data estimation is an important challenge with high-dimensional data arranged in
the form of a matrix. Typically this data matrix is transposable, meaning that either the rows, …

Convex biclustering

EC Chi, GI Allen, RG Baraniuk - Biometrics, 2017 - academic.oup.com
In the biclustering problem, we seek to simultaneously group observations and features.
While biclustering has applications in a wide array of domains, ranging from text mining to …

A local poisson graphical model for inferring networks from sequencing data

GI Allen, Z Liu - IEEE transactions on nanobioscience, 2013 - ieeexplore.ieee.org
Gaussian graphical models, a class of undirected graphs or Markov Networks, are often
used to infer gene networks based on microarray expression data. Many scientists, however, …

On Poisson graphical models

E Yang, PK Ravikumar, GI Allen… - Advances in neural …, 2013 - proceedings.neurips.cc
Undirected graphical models, such as Gaussian graphical models, Ising, and multinomial/categorical
graphical models, are widely used in a variety of applications for modeling …