User profiles for F. Chiaromonte
Francesca ChiaromonteProfessor of Statistics, Pennsylvania State University, Sant'Anna School of Advanced … Verified email at psu.edu Cited by 22569 |
[HTML][HTML] Complete Khoisan and Bantu genomes from southern Africa
The genetic structure of the indigenous hunter-gatherer peoples of southern Africa, the oldest
known lineage of modern human, is important for understanding human diversity. Studies …
known lineage of modern human, is important for understanding human diversity. Studies …
Scoring pairwise genomic sequence alignments
F Chiaromonte, VB Yap, W Miller - Biocomputing 2002, 2001 - World Scientific
The parameters by which alignments are scored can strongly affect sensitivity and specificity
of alignment procedures. While appropriate parameter choices are well understood for …
of alignment procedures. While appropriate parameter choices are well understood for …
Evidence for sharp increase in the economic damages of extreme natural disasters
Climate change has increased the frequency and intensity of natural disasters. Does this
translate into increased economic damages? To date, empirical assessments of damage trends …
translate into increased economic damages? To date, empirical assessments of damage trends …
Contour regression: a general approach to dimension reduction
… in a typical location regression of the form Y = f (X) + ε with X and ε independent and both
normally distributed, this assumption is not met unless f(·) is linear. Because of its generality, …
normally distributed, this assumption is not met unless f(·) is linear. Because of its generality, …
[HTML][HTML] Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
RA Gutiérrez, LV Lejay, A Dean, F Chiaromonte… - Genome biology, 2007 - Springer
Background Carbon (C) and nitrogen (N) metabolites can regulate gene expression in
Arabidopsis thaliana. Here, we use multinetwork analysis of microarray data to identify molecular …
Arabidopsis thaliana. Here, we use multinetwork analysis of microarray data to identify molecular …
The genome-wide determinants of human and chimpanzee microsatellite evolution
YD Kelkar, S Tyekucheva, F Chiaromonte… - Genome …, 2008 - genome.cshlp.org
Mutation rates of microsatellites vary greatly among loci. The causes of this heterogeneity
remain largely enigmatic yet are crucial for understanding numerous human neurological …
remain largely enigmatic yet are crucial for understanding numerous human neurological …
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution
Six measures of evolutionary change in the human genome were studied, three derived
from the aligned human and mouse genomes in conjunction with the Mouse Genome …
from the aligned human and mouse genomes in conjunction with the Mouse Genome …
Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression
The transcription factor GATA1 regulates an extensive program of gene activation and
repression during erythroid development. However, the associated mechanisms, including the …
repression during erythroid development. However, the associated mechanisms, including the …
Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA
…, TS Korneliussen, F Chiaromonte… - Proceedings of the …, 2014 - National Acad Sciences
The manifestation of mitochondrial DNA (mtDNA) diseases depends on the frequency of
heteroplasmy (the presence of several alleles in an individual), yet its transmission across …
heteroplasmy (the presence of several alleles in an individual), yet its transmission across …
Envelope models for parsimonious and efficient multivariate linear regression
… A basis matrix f subspace S is any matrix whose columns form a basis for S. A semi-ortho …
The particular method proposed by Cook, Li and Chiaromonte (2007) is a first step along these …
The particular method proposed by Cook, Li and Chiaromonte (2007) is a first step along these …