Literature-curated protein interaction datasets

…, M Galli, J Yazaki, DE Hill, JR Ecker, FP Roth… - Nature …, 2009 - nature.com
High-quality datasets are needed to understand how global and local properties of protein-protein
interaction, or 'interactome', networks relate to biological mechanisms, and to guide …

Unresolved mysteries: How do metalinguistic and narrative skills connect with early reading?

FP Roth, DL Speece, DH Cooper… - The Journal of Special …, 1996 - journals.sagepub.com
In both special education and speech-language pathology literature, it is commonly assumed
that children's reading difficulties have their roots in early oral language disabilities. Data …

Introns in UTRs: why we should stop ignoring them

AA Bicknell, C Cenik, HN Chua, FP Roth… - Bioessays, 2012 - Wiley Online Library
Although introns in 5′‐ and 3′‐untranslated regions (UTRs) are found in many protein
coding genes, rarely are they considered distinctive entities with specific functions. Indeed, …

Towards a proteome-scale map of the human protein–protein interaction network

…, L Doucette-Stamm, ME Cusick, DE Hill, FP Roth… - Nature, 2005 - nature.com
Systematic mapping of protein–protein interactions, or ‘interactome’ mapping, was initiated
in model organisms, starting with defined biological processes 1 , 2 and then expanding to …

Global mapping of the yeast genetic interaction network

…, J Greenblatt, M Peter, A Bretscher, G Bell, FP Roth… - science, 2004 - science.org
A genetic interaction network containing ∼1000 genes and ∼4000 interactions was mapped
by crossing mutations in 132 different query genes into a set of ∼4700 viable gene yeast …

The genetic landscape of a cell

…, M Brudno, S Ragibizadeh, B Papp, C Pál, FP Roth… - science, 2010 - science.org
A genome-scale genetic interaction map was constructed by examining 5.4 million gene-gene
pairs for synthetic genetic interactions, generating quantitative genetic interaction profiles …

A Map of the Interactome Network of the Metazoan C. elegans

…, KC Gunsalus, JW Harper, ME Cusick, FP Roth… - Science, 2004 - science.org
To initiate studies on how protein-protein interaction (or “interactome”) networks relate to
multicellular functions, we have mapped a large fraction of the Caenorhabditis elegans …

Evidence for dynamically organized modularity in the yeast protein–protein interaction network

…, D Dupuy, AJM Walhout, ME Cusick, FP Roth… - Nature, 2004 - nature.com
In apparently scale-free protein–protein interaction networks, or ‘interactome’ networks 1 , 2
, most proteins interact with few partners, whereas a small but significant proportion of …

High-quality binary protein interaction map of the yeast interactome network

…, ME Cusick, T Moore, C Boone, M Snyder, FP Roth… - Science, 2008 - science.org
Current yeast interactome network maps contain several hundred molecular complexes with
limited and somewhat controversial representation of direct binary interactions. We carried …

[HTML][HTML] High-resolution CRISPR screens reveal fitness genes and genotype-specific cancer liabilities

…, S Sun, P Mero, P Dirks, S Sidhu, FP Roth… - Cell, 2015 - cell.com
The ability to perturb genes in human cells is crucial for elucidating gene function and holds
great potential for finding therapeutic targets for diseases such as cancer. To extend the …