Ensembl ( https://www.ensembl.org ) is unique in its flexible infrastructure for access to genomic
data and annotation. It has been designed to efficiently deliver annotation at scale for all …

The Ensembl project ( https://www.ensembl.org ) annotates genomes and disseminates
genomic data for vertebrate species. We create detailed and comprehensive annotation of gene …

Ensembl ( https://www.ensembl.org ) has produced high-quality genomic resources for
vertebrates and model organisms for more than twenty years. During that time, our resources, …

We report full-length draft de novo genome assemblies for 16 widely used inbred mouse strains
and find extensive strain-specific haplotype variation. We identify and characterize 2,567 …

To mechanistically characterize the microevolutionary processes active in altering
transcription factor (TF) binding among closely related mammals, we compared the genome-wide …

Gene expression levels are thought to diverge primarily via regulatory mutations in trans
within species, and in cis between species. To test this hypothesis in mammals we used RNA-…

… (C) Examples of class A, B, and C transcripts showing the behavior of individual clones (C)
with respect to the d score and p value. (D) Summary table of the number of genes and …

The Orthology Benchmark Service ( https://orthology.benchmarkservice.org ) is the gold
standard for orthology inference evaluation, supported and maintained by the Quest for …

… (D) Missing adjacencies are recovered based on the graph structure and phylogenetic
tree. Since T is closer to R 1 , the algorithm prefers the pair of breakpoints (b t , c h ), (…

… (D) The rate of synteny breaks between sequential internal branch points of the Muridae
and Hominidae clades. Muridae have undergone a punctuate increase in the rate of syntenic …