MRtrix3 is an open-source, cross-platform software package for medical image processing,
analysis and visualisation, with a particular emphasis on the investigation of the brain using …

Diffusion MRI has provided the neuroimaging community with a powerful tool to acquire in-vivo
data sensitive to microstructural features of white matter, up to 3 orders of magnitude …

… fibre population using an axially symmetric diffusion tensor, D, with FA of 0.7, a mean ADC …
) M i = f 1 e − b r i T D 1 r i + ( 1 − f 1 ) e − − b r i T D 2 r i where f 1 is the partial volume fraction …

… (d) Warps estimated from registration were used to warp FOD images to template space. (e)
Each FOD in the warped images was segmented to estimate a measure of FD per fixel. …

… Where c l m , and d l m represents the coefficient for the real valued SH function of degree l
… ( ϕ 2 ( x ′ , 0.5 ) J ) l m 2 d x where R l m describes the SH coefficient of degree l and order …

… 2d. Probabilistic streamlines are used to compute the connectivity to all other white matter
fixels (Fig. 2d shows only those streamlines extracted from the whole-brain tractogram that …

Target audience: people interested in obtaining multi-tissue CSD results from single-shell or
multi-shell data without any hassle Purpose: To overcome the fact that the fibre orientation …

Alzheimer’s disease is increasingly considered a large-scale network disconnection syndrome,
associated with progressive aggregation of pathological proteins, cortical atrophy, and …

… to the bids-app-dev mailing list at https://groups.google.com/d/forum/bids-apps-dev. … Where
D:\singularity_images is a path where the Singularity image will be stored. After transferring …

Multi-shell multi-tissue constrained spherical deconvolution (MSMT-CSD) and single-shell 3-tissue
CSD (SS3T-CSD) decompose the diffusion MRI signal in a white matter (WM) fibre …