[HTML][HTML] A chromosome conformation capture ordered sequence of the barley genome

…, J Tanskanen, A Chailyan, D Sampath, D Heavens… - Nature, 2017 - nature.com
Cereal grasses of the Triticeae tribe have been the major food source in temperate regions
since the dawn of agriculture. Their large genomes are characterized by a high content of …

[HTML][HTML] Multiple wheat genomes reveal global variation in modern breeding

…, J Deek, AC Costamagna, P Fobert, D Heavens… - Nature, 2020 - nature.com
… A, B and D in these designations correspond to separate subgenomes derived from three
ancestral diploid species with similar but distinct genome structure and gene content that …

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

…, D Heavens, M Alston, D Swarbreck… - The ISME …, 2013 - academic.oup.com
Plant–microbe interactions in the rhizosphere have important roles in biogeochemical cycling,
and maintenance of plant health and productivity, yet remain poorly understood. Using …

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …

…, P Borrill, G Kettleborough, D Heavens… - Genome …, 2017 - genome.cshlp.org
Advances in genome sequencing and assembly technologies are generating many high-quality
genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …

[HTML][HTML] A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus

J Barke, RF Seipke, S Grüschow, D Heavens, N Drou… - BMC biology, 2010 - Springer
Background Attine ants live in an intensely studied tripartite mutualism with the fungus
Leucoagaricus gongylophorus, which provides food to the ants, and with antibiotic-producing …

[HTML][HTML] Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples

S Martin, D Heavens, Y Lan, S Horsfield, MD Clark… - Genome biology, 2022 - Springer
Adaptive sampling is a method of software-controlled enrichment unique to nanopore
sequencing platforms. To test its potential for enrichment of rarer species within metagenomic …

[HTML][HTML] Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

…, S Grasso, J Tanskanen, D Sampath, D Heavens… - Scientific Data, 2017 - nature.com
Barley (Hordeum vulgare L.) is a cereal grass mainly used as animal fodder and raw
material for the malting industry. The map-based reference genome sequence of barley cv.‘Morex’…

[PDF][PDF] Arabidopsis thaliana and Pseudomonas pathogens exhibit stable associations over evolutionary timescales

…, C Friedemann, W Ding, M Giolai, D Heavens… - Cell host & …, 2018 - cell.com
Crop disease outbreaks are often associated with clonal expansions of single pathogenic
lineages. To determine whether similar boom-and-bust scenarios hold for wild pathosystems, …

[HTML][HTML] Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens

RM Leggett, C Alcon-Giner, D Heavens, S Caim… - Nature …, 2020 - nature.com
The MinION sequencing platform offers near real-time analysis of DNA sequence; this
makes the tool attractive for deployment in fieldwork or clinical settings. We used the MinION …

An Ultra High-Density Arabidopsis thaliana Crossover Map That Refines the Influences of Structural Variation and Epigenetic Features

BA Rowan, D Heavens, TR Feuerborn, AJ Tock… - Genetics, 2019 - academic.oup.com
… Dobzhansky first observed reduced crossing over near interchromosomal translocations in
D. melanogaster (Dobzhansky 1931), and this has been observed in other species (McKim et …