The Solar Wind Electrons Alphas and Protons (SWEAP) Investigation on Solar Probe Plus
is a four sensor instrument suite that provides complete measurements of the electrons and …

… (C and D) Density plot showing DFMO effects on transcriptome (C) and chromatin accessibility
(D). Genes or loci are divided into those upregulated or more accessible, respectively, in …

We present Vision, a tool for annotating the sources of variation in single cell RNA-seq data
in an automated and scalable manner. Vision operates directly on the manifold of cell-cell …

… (D) PCA of the QC measures for all cells in (A). PCs of QC measures are labeled ‘‘qPCs’’ to
distinguish them from expression PCs. Single-cell QC profiles cluster by batch, representing …

… DeTomaso and Yosef propose a novel, graph-based method for this purpose with improved
… Data and code availability d This paper analyzes existing, publicly available data. These …

… Let P(E ij ∣N o t D ij ) denote the probability that a gene i is expressed in cell j conditioned
… for the detection, P(D ij ), and expression, P(E ij ), events: For P(D ij ) we use the percentage …

Many mechanisms have been proposed for how heightened aerobic glycolytic metabolism
fuels cancer pathogenicity, but there are still many unexplored pathways. Here, we have …

Extremely preterm infants frequently require some form of respiratory assistance to facilitate
the cardiopulmonary transition that occurs in the first hours of life. Current resuscitation …

… (D) Spearman correlation of Compass scores of single reactions with the expression of pro-…
Reactions are colored by the sign of their Cohen d’s statistic, and are opaque or transparent …

… ACA Computational analyses of single-cell and population RNA-seq data were performed
by D. DeTomaso and NY with additional help from SJR The manuscript was written by MP, D. …