User profiles for D. S. Rokhsar
Daniel RokhsarProfessor of Genetics, University of California Berkeley Verified email at berkeley.edu Cited by 94241 |
[HTML][HTML] The cassava genome: current progress, future directions
…, C Fauquet, J Tohme, T Harkins, DS Rokhsar… - Tropical plant …, 2012 - Springer
The starchy swollen roots of cassava provide an essential food source for nearly a billion
people, as well as possibilities for bioenergy, yet improvements to nutritional content and …
people, as well as possibilities for bioenergy, yet improvements to nutritional content and …
Plant pan-genomics comes of age
…, D Goodstein, GA Wu, DS Rokhsar… - Annual Review of …, 2021 - annualreviews.org
A pan-genome is the nonredundant collection of genes and/or DNA sequences in a species.
Numerous studies have shown that plant pan-genomes are typically much larger than the …
Numerous studies have shown that plant pan-genomes are typically much larger than the …
Pathways for protein folding: is a new view needed?
…, AY Grosberg, T Tanaka, DS Rokhsar - Current opinion in …, 1998 - Elsevier
Theoretical studies using simplified models of proteins have shed light on the general
heteropolymeric aspects of the folding problem. Recent work has emphasized the statistical …
heteropolymeric aspects of the folding problem. Recent work has emphasized the statistical …
Phytozome: a comparative platform for green plant genomics
…, U Hellsten, N Putnam, DS Rokhsar - Nucleic acids …, 2012 - academic.oup.com
The number of sequenced plant genomes and associated genomic resources is growing
rapidly with the advent of both an increased focus on plant genomics from funding agencies, …
rapidly with the advent of both an increased focus on plant genomics from funding agencies, …
[HTML][HTML] The Sorghum bicolor genome and the diversification of grasses
Sorghum, an African grass related to sugar cane and maize, is grown for food, feed, fibre
and fuel. We present an initial analysis of the ∼730-megabase Sorghum bicolor (L.) Moench …
and fuel. We present an initial analysis of the ∼730-megabase Sorghum bicolor (L.) Moench …
The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions
…, G Werner, K Zhou, IV Grigoriev, DS Rokhsar… - Science, 2007 - science.org
Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land
plants over 1 billion years ago. It is a model system for studying chloroplast-based …
plants over 1 billion years ago. It is a model system for studying chloroplast-based …
Community structure and metabolism through reconstruction of microbial genomes from the environment
Microbial communities are vital in the functioning of all ecosystems; however, most microorganisms
are uncultivated, and their roles in natural systems are unclear. Here, using random …
are uncultivated, and their roles in natural systems are unclear. Here, using random …
The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism
Diatoms are unicellular algae with plastids acquired by secondary endosymbiosis. They are
responsible for ∼20% of global carbon fixation. We report the 34 million–base pair draft …
responsible for ∼20% of global carbon fixation. We report the 34 million–base pair draft …
The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins
…, S Lucas, Y Kohara, M Levine, N Satoh, DS Rokhsar - Science, 2002 - science.org
The first chordates appear in the fossil record at the time of the Cambrian explosion, nearly
550 million years ago. The modern ascidian tadpole represents a plausible approximation to …
550 million years ago. The modern ascidian tadpole represents a plausible approximation to …
[HTML][HTML] The Phaeodactylum genome reveals the evolutionary history of diatom genomes
Diatoms are photosynthetic secondary endosymbionts found throughout marine and
freshwater environments, and are believed to be responsible for around one-fifth of the primary …
freshwater environments, and are believed to be responsible for around one-fifth of the primary …