User profiles for C. Vollmers

Christopher Vollmers

Associate Professor in Biomolecular Engineering, UC Santa Cruz; UC Santa Cruz Genomics …
Verified email at ucsc.edu
Cited by 7656

Realizing the potential of full-length transcriptome sequencing

…, C Cole, R Volden, C Vollmers - … Transactions of the …, 2019 - royalsocietypublishing.org
Long-read sequencing holds great potential for transcriptome analysis because it offers
researchers an affordable method to annotate the transcriptomes of non-model organisms. This, …

[PDF][PDF] Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet

M Hatori, C Vollmers, A Zarrinpar, L DiTacchio… - Cell metabolism, 2012 - cell.com
… compared to their ad lib-fed counterparts, with higher RER during feeding and reduced RER
during fasting, indicative of increased glycolysis and fat oxidation, respectively (Figure 1C). …

The 2016 update of the International Study Group (ISGPS) definition and grading of postoperative pancreatic fistula: 11 years after

…, T Takada, K Takaori, W Traverso, CR Vollmer… - Surgery, 2017 - Elsevier
… cohort of grades A, B, and C or only to the CR grades B and C POPF, questioning the clinical
… as high as those that report only grades B and C POPF. A recent, multicenter, multinational …

Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression

C Vollmers, S Gill, L DiTacchio… - Proceedings of the …, 2009 - National Acad Sciences
… Total and phosphorylated protein levels of CREB (A and C) and AKT (B and D) in livers of
WT (A and B), and cry1 −/− ;cry2 −/− mice (C and D) under ad lib and tRF feeding conditions. …

[HTML][HTML] Harmonics of circadian gene transcription in mammals

ME Hughes, L DiTacchio, KR Hayes, C Vollmers… - PLoS …, 2009 - journals.plos.org
… To demonstrate that core clock genes cycle well in these data sets, panels C–F show the
microarray intensity from two representative genes was plotted against CT time for both NIH3T3 …

[HTML][HTML] Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells

…, EC Forsberg, M Akeson, C Vollmers - Nature …, 2017 - nature.com
… Hifi Readymix 2 × (KAPA) step was performed incubating at 95 C for 3 min, followed by 27
cycles of (98 C for 20 s, 67 C for 15 s, 72 C for 4 min), with a final extension at 72 C for 5 min. …

[HTML][HTML] Molecular-level analysis of the serum antibody repertoire in young adults before and after seasonal influenza vaccination

…, DR Boutz, V Chromikova, MG Joyce, C Vollmers… - Nature medicine, 2016 - nature.com
Molecular understanding of serological immunity to influenza has been confounded by the
complexity of the polyclonal antibody response in humans. Here we used high-resolution …

[HTML][HTML] Inducible ablation of melanopsin-expressing retinal ganglion cells reveals their central role in non-image forming visual responses

…, H Le, C Vollmers, SR Keding, N Tanaka, C Schmedt… - PloS one, 2008 - journals.plos.org
… (C) Strategy to achieve inducible and specific ablation of mRGCs. Opn4 Cre/+ mouse was
bred to a mouse expressing Cre-dependent expression of simian diphtheria toxin receptor. …

Genetic measurement of memory B-cell recall using antibody repertoire sequencing

C Vollmers, RV Sit, JA Weinstein… - Proceedings of the …, 2013 - National Acad Sciences
… of one mismatch (Table S1) (98 C for 2 min, 52 C for 2 min, and 72 C for 10 min). Double-…
(95 C for 2 min, 27 cycles of 95C for 30 s, 65 C for 30s, and 68 C for 2 min, and 68 C for 7 …

[PDF][PDF] Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome

C Vollmers, RJ Schmitz, J Nathanson, G Yeo, JR Ecker… - Cell metabolism, 2012 - cell.com
… throughout 24 hr, with moderate prevalence in the subjective morning (CT21–CT3: 301
transcripts or $24%) and subjective evening (CT9–CT15; 373 transcripts or 37.5%) (Figure 1C) …