[PDF][PDF] A convergence-based framework for cancer drug resistance
DJ Konieczkowski, CM Johannessen, LA Garraway - Cancer cell, 2018 - cell.com
Despite advances in cancer biology and therapeutics, drug resistance remains problematic.
Resistance is often multifactorial, heterogeneous, and prone to undersampling. Nonetheless…
Resistance is often multifactorial, heterogeneous, and prone to undersampling. Nonetheless…
Next-generation characterization of the cancer cell line encyclopedia
…, JD Jaffe, AA Lane, DM Weinstock, CM Johannessen… - Nature, 2019 - nature.com
Large panels of comprehensively characterized human cancer models, including the Cancer
Cell Line Encyclopedia (CCLE), have provided a rigorous framework with which to study …
Cell Line Encyclopedia (CCLE), have provided a rigorous framework with which to study …
COT drives resistance to RAF inhibition through MAP kinase pathway reactivation
Oncogenic mutations in the serine/threonine kinase B-RAF (also known as BRAF) are found
in 50–70% of malignant melanomas 1 . Pre-clinical studies have demonstrated that the B-…
in 50–70% of malignant melanomas 1 . Pre-clinical studies have demonstrated that the B-…
Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
…, A Gaillard, KE Kolb, AC Villani, CM Johannessen… - Science, 2016 - science.org
To explore the distinct genotypic and phenotypic states of melanoma tumors, we applied
single-cell RNA sequencing (RNA-seq) to 4645 single cells isolated from 19 patients, profiling …
single-cell RNA sequencing (RNA-seq) to 4645 single cells isolated from 19 patients, profiling …
[HTML][HTML] Dissecting therapeutic resistance to RAF inhibition in melanoma by tumor genomic profiling
…, SM Kehoe, CM Johannessen… - Journal of clinical …, 2011 - ncbi.nlm.nih.gov
A detailed understanding of the mechanisms by which tumors acquire resistance to targeted
anticancer agents should speed the development of treatment strategies with lasting clinical …
anticancer agents should speed the development of treatment strategies with lasting clinical …
The genetic landscape of clinical resistance to RAF inhibition in metastatic melanoma
…, N Wagle, A Sucker, DJ Treacy, CM Johannessen… - Cancer discovery, 2014 - AACR
Most patients with BRAF V600 -mutant metastatic melanoma develop resistance to selective
RAF kinase inhibitors. The spectrum of clinical genetic resistance mechanisms to RAF …
RAF kinase inhibitors. The spectrum of clinical genetic resistance mechanisms to RAF …
[HTML][HTML] Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors
…, M Nakabayashi, ME Taplin, CM Johannessen… - Nature …, 2017 - nature.com
Whole-exome sequencing of cell-free DNA (cfDNA) could enable comprehensive profiling
of tumors from blood but the genome-wide concordance between cfDNA and tumor biopsies …
of tumors from blood but the genome-wide concordance between cfDNA and tumor biopsies …
The NF1 tumor suppressor critically regulates TSC2 and mTOR
CM Johannessen, EE Reczek… - Proceedings of the …, 2005 - National Acad Sciences
… MPNSTs were seeded at 6.5 × 10 4 cells per 6-cm well in normal growth medium containing
rapamycin (0.01, 0.1, 1.0, 10, or 100 nM) or an equal volume of vector (DMSO). After 7 days, …
rapamycin (0.01, 0.1, 1.0, 10, or 100 nM) or an equal volume of vector (DMSO). After 7 days, …
[HTML][HTML] A negative feedback signaling network underlies oncogene-induced senescence
…, BW Johnson, LT McGillicuddy, CM Johannessen… - Cancer cell, 2006 - cell.com
Oncogene-induced senescence functions to limit tumor development. However, a complete
understanding of the signals that trigger this type of senescence is currently lacking. We …
understanding of the signals that trigger this type of senescence is currently lacking. We …
A public genome-scale lentiviral expression library of human ORFs
…, O Alkan, T Bhimdi, TM Green, CM Johannessen… - Nature …, 2011 - nature.com
Functional characterization of the human genome requires tools for systematically modulating
gene expression in both loss-of-function and gain-of-function experiments. We describe …
gene expression in both loss-of-function and gain-of-function experiments. We describe …