User profiles for C. A. Cassa

Christopher Cassa

Assistant Professor, Harvard Medical School; Lecturer, Massachusetts Institute of …
Verified email at mit.edu
Cited by 3372

[HTML][HTML] Polygenic background modifies penetrance of monogenic variants for tier 1 genomic conditions

…, A Philippakis, PT Ellinor, CA Cassa… - Nature …, 2020 - nature.com
Genetic variation can predispose to disease both through (i) monogenic risk variants that
disrupt a physiologic pathway with large effect on disease and (ii) polygenic risk that involves …

Predictable and precise template-free CRISPR editing of pathogenic variants

…, D Worstell, SJ Culbertson, O Krabbe, CA Cassa… - Nature, 2018 - nature.com
Following Cas9 cleavage, DNA repair without a donor template is generally considered
stochastic, heterogeneous and impractical beyond gene disruption. Here, we show that template-…

[PDF][PDF] Determinants of base editing outcomes from target library analysis and machine learning

…, MW Shen, B Mok, C Wilson, Ż Matuszek, CA Cassa… - Cell, 2020 - cell.com
Although base editors are widely used to install targeted point mutations, the factors that
determine base editing outcomes are not well understood. We characterized sequence-activity …

[HTML][HTML] Twitter as a sentinel in emergency situations: lessons from the Boston marathon explosions

CA Cassa, R Chunara, K Mandl, JS Brownstein - PLoS currents, 2013 - ncbi.nlm.nih.gov
… Christopher Cassa and Rumi Chunara contributed equally to … Cassa) and by NLM grant
LM009776 (Dr. Chunara and Dr. … Cassa, Harvard Medical SchoolBrigham and Women's …

Heterogeneous nucleation of ice in (NH4)2SO4‐H2O particles with mineral dust immersions

B Zuberi, AK Bertram, CA Cassa… - Geophysical …, 2002 - Wiley Online Library
Using optical microscopy, we investigated the heterogeneous nucleation of ice in aqueous (NH
4 ) 2 SO 4 ‐H 2 O particles containing two types of mineral dusts, kaolinite and …

Estimating the selective effects of heterozygous protein-truncating variants from human exome data

CA Cassa, D Weghorn, DJ Balick, DM Jordan… - Nature …, 2017 - nature.com
The evolutionary cost of gene loss is a central question in genetics and has been investigated
in model organisms and human cell lines 1, 2, 3. In humans, tolerance of the loss of one or …

[HTML][HTML] An integrated clinical program and crowdsourcing strategy for genomic sequencing and Mendelian disease gene discovery

A Haghighi, JB Krier, A Toth-Petroczy, CA Cassa… - NPJ genomic …, 2018 - nature.com
Despite major progress in defining the genetic basis of Mendelian disorders, the molecular
etiology of many cases remains unknown. Patients with these undiagnosed disorders often …

The missing link between genetic association and regulatory function

…, S Chun, C Cotsapas, CA Cassa… - Elife, 2022 - elifesciences.org
The genetic basis of most traits is highly polygenic and dominated by non-coding alleles. It
is widely assumed that such alleles exert small regulatory effects on the expression of cis-…

[HTML][HTML] An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the …

…, L Medne, SR Sunyaev, I Adzhubey, CA Cassa… - Genome biology, 2014 - Springer
Background There is tremendous potential for genome sequencing to improve clinical diagnosis
and care once it becomes routinely accessible, but this will require formalizing research …

Identification of cis-suppression of human disease mutations by comparative genomics

DM Jordan, SG Frangakis, C Golzio, CA Cassa… - Nature, 2015 - nature.com
Patterns of amino acid conservation have served as a tool for understanding protein evolution
1 . The same principles have also found broad application in human genomics, driven by …