User profiles for B. Sundararaman

Balaji Sundararaman

UCSC
Verified email at ucsc.edu
Cited by 4982

Clock synchronization for wireless sensor networks: a survey

B Sundararaman, U Buy, AD Kshemkalyani - Ad hoc networks, 2005 - Elsevier
… − T 3 and b = T 2 … If the network delay difference from A to B and from B to A, called
differential delay, is small, the clock offset θ and round-trip delay δ of B relative to A at time T 4 are …

Myocardial AKT: the omnipresent nexus

…, D Avitabile, R Alvarez, B Sundararaman… - Physiological …, 2011 - journals.physiology.org
One of the greatest examples of integrated signal transduction is revealed by examination
of effects mediated by AKT kinase in myocardial biology. Positioned at the intersection of …

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)

…, C Gelboin-Burkhart, MY Fang, B Sundararaman… - Nature …, 2016 - nature.com
… (b) Each point represents a successful experiment in a, with the x-axis indicating the eCT
of the best replicate (denoted as replicate 1) and the y-axis indicating the increase in eCT …

[HTML][HTML] A large-scale binding and functional map of human RNA-binding proteins

…, NAL Cody, D Dominguez, S Olson, B Sundararaman… - Nature, 2020 - nature.com
Many proteins regulate the expression of genes by binding to specific regions encoded in the
genome 1. Here we introduce a new data set of RNA elements in the human genome that …

The Ro60 autoantigen binds endogenous retroelements and regulates inflammatory gene expression

T Hung, GA Pratt, B Sundararaman, MJ Townsend… - Science, 2015 - science.org
Autoantibodies target the RNA binding protein Ro60 in systemic lupus erythematosus (SLE)
and Sjögren’s syndrome. However, it is unclear whether Ro60 and its associated RNAs …

[HTML][HTML] Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

…, AQ Vu, KR Hutt, FJ Martinez, B Sundararaman… - Nature …, 2016 - nature.com
The RNA-binding protein (RBP) TAF15 is implicated in amyotrophic lateral sclerosis (ALS).
To compare TAF15 function to that of two ALS-associated RBPs, FUS and TDP-43, we …

[HTML][HTML] Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins

…, TB Nguyen, I Rabano, R Stanton, B Sundararaman… - Genome biology, 2020 - Springer
Background A critical step in uncovering rules of RNA processing is to study the in vivo
regulatory networks of RNA binding proteins (RBPs). Crosslinking and immunoprecipitation (CLIP…

[HTML][HTML] Transformative Role of Artificial Intelligence in Advancing Sustainable Tomato (Solanum lycopersicum) Disease Management for Global Food Security: A …

B Sundararaman, S Jagdev, N Khatri - Sustainability, 2023 - mdpi.com
The growing global population and accompanying increase in food demand has put pressure
on agriculture to produce higher yields in the face of numerous challenges, including plant …

[PDF][PDF] Protein-RNA networks regulated by normal and ALS-associated mutant HNRNPA2B1 in the nervous system

…, SM Broski, HJ Kim, R Lardelli, B Sundararaman… - Neuron, 2016 - cell.com
HnRNPA2B1 encodes an RNA binding protein associated with neurodegeneration.
However, its function in the nervous system is unclear. Transcriptome-wide crosslinking and …

[PDF][PDF] Resources for the comprehensive discovery of functional RNA elements

B Sundararaman, L Zhan, SM Blue, R Stanton, K Elkins… - Molecular cell, 2016 - cell.com
… 1B) is less than the band intensity of the 2.5% Input sample (Lane 1). An additional 3.9% of
the tested antibodies represented by AKAP8L in Figure 1B… CNOT8 in Figure 1B) that can only …