User profiles for B. Bunk
Boyke BunkHead of Bioinformatics, Leibniz Institute DSMZ Verified email at dsmz.de Cited by 6414 |
Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium
…, M Diehl, S Herp, Y Lötscher, S Hussain, B Bunk… - Nature …, 2016 - nature.com
… Based on these data, we conclude that B. longum subsp. animalis YL2 either does not … and
mice were killed at day 2 pi b–d, S. Tm avir loads at day 1 pi in the faeces (b), and at day 2 pi …
mice were killed at day 2 pi b–d, S. Tm avir loads at day 1 pi in the faeces (b), and at day 2 pi …
The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea
…, M Berger, T Brinkhoff, I Buchholz, B Bunk… - The ISME …, 2010 - academic.oup.com
… B 1 and B 12 for which its host is auxotrophic. Two pathways for the de novo synthesis of
vitamin B … The de novo synthesis of vitamin B 12 was confirmed to be functional, and D. shibae …
vitamin B … The de novo synthesis of vitamin B 12 was confirmed to be functional, and D. shibae …
Global outbreak of severe Mycobacterium chimaera disease after cardiac surgery: a molecular epidemiological study
…, A Thürmer, C Utpatel, C Spröer, B Bunk… - The Lancet Infectious …, 2017 - thelancet.com
Background Since 2013, over 100 cases of Mycobacterium chimaera prosthetic valve
endocarditis and disseminated disease were notified in Europe and the USA, linked to …
endocarditis and disseminated disease were notified in Europe and the USA, linked to …
Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319
M Eppinger, B Bunk, MA Johns… - Journal of …, 2011 - Am Soc Microbiol
… Here, we report the analysis of the first complete genome sequences of two important B.
megaterium strains, the plasmidless strain DSM319 and QM B1551, which harbors seven …
megaterium strains, the plasmidless strain DSM319 and QM B1551, which harbors seven …
Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology
…, A Heuer, P Rast, S Oberbeckmann, B Bunk… - Nature …, 2020 - nature.com
… b, Most of the known planctomycetes, such as the pear-shaped P. limnophila ((i) and (ii)),
divide by polar budding. Budding was indeed frequently observed among our isolates, not only …
divide by polar budding. Budding was indeed frequently observed among our isolates, not only …
Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum
… (b) Phylogenetic tree of the same set of sequences reconstructed with the ARB neighbor-joining
program using the sequence of Verrucomicrobium spinosum DSM 4136T as outgroup (…
program using the sequence of Verrucomicrobium spinosum DSM 4136T as outgroup (…
[HTML][HTML] High quality genome sequences of thirteen Hypoxylaceae (Ascomycota) strengthen the phylogenetic family backbone and enable the discovery of new taxa
… Multi-locus bootstrap values (MLBS) and posterior probability (pp) values for the species
tree are given on nodes for tree B. Branch length for tree A is shown as nucleotide substitutions …
tree are given on nodes for tree B. Branch length for tree A is shown as nucleotide substitutions …
The complex methylome of the human gastric pathogen Helicobacter pylori
J Krebes, RD Morgan, B Bunk, C Spröer… - Nucleic acids …, 2014 - academic.oup.com
… pylori 26695 (A) and J99-R3 (B). The outermost and innermost tracks represent the interpulse
duration ratios. The colored tracks in between represent the location of methylation of the …
duration ratios. The colored tracks in between represent the location of methylation of the …
[HTML][HTML] A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity
…, E Allen-Vercoe, C Spröer, B Bunk… - Nature …, 2020 - nature.com
Our knowledge about the gut microbiota of pigs is still scarce, despite the importance of these
animals for biomedical research and agriculture. Here, we present a collection of cultured …
animals for biomedical research and agriculture. Here, we present a collection of cultured …
Long‐read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments
… 66% were classified the same by LSU (Figure 5b). ITS classifications matched those of
SSU (Figure 5c) and LSU (Figure 5d) at ranks from kingdom to class. At family, genus and …
SSU (Figure 5c) and LSU (Figure 5d) at ranks from kingdom to class. At family, genus and …